PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000091.1_g250.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1100aa MW: 123175 Da PI: 6.3125

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000091.1_g250.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	164.9	1.3e-51	183	302	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpks.....gsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvev 80 +e ++rwlk+ e+++iL+n+ek++lt e++++p+s gsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ e+ Pav_sc0000091.1_g250.1.mk 183 QEaQTRWLKPAEVLSILQNHEKFKLTPEPPQQPSSkspfgGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKVGNAET 266 5669*********************999988765555599************************************** PP CG-1 81 lycyYahseenptfqrrcywlLeeelekivlvhyle 116 l+cyYah+e+np+fqrr+yw+L+ + e+ivlvhy+e Pav_sc0000091.1_g250.1.mk 267 LNCYYAHGEDNPNFQRRSYWMLDPASEHIVLVHYRE 302 ********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1100 aa Download sequence
MLNDENNPPF RSRYPSIPLL RGICRCCSGL SIIPGKYTIS GLDICTHDAN REASNFEAMA 60 RFSAGQLVFA TSSEHEASWR QVAQDSNSPL LCLRPFVPDF LVVVSFTIHL VLVALVSVDY 120 FPFEAEAPSS RPTLGQQRAH LVVLVDANEH KSNAFSAVRR QVLIFRQSLN MMQSGFNIDD 180 LFQEAQTRWL KPAEVLSILQ NHEKFKLTPE PPQQPSSKSP FGGSLFLFNK RVLRFFRRDG 240 HHWRKKKDGR TVGEAHERLK VGNAETLNCY YAHGEDNPNF QRRSYWMLDP ASEHIVLVHY 300 REISEGKSST GSFAQSPVSS SSFSHSPSSK TTQNRGSISI ISDLREPYQN LSSPGSVEVN 360 SDVAIKKNGR ENPDKLYGTG ESDSSAKFDV SQALRRLEEQ LSLNEDSFDE FVDDNPNSDI 420 MDRFNEFLDD TNGSDILEDH SDMTNQDQFT AFHGPEYVVH DQFYGGRAQM QGNANNSGEH 480 SQFIGQEFAD RNKESAPWKE VLDSCKPSSV VEPKEKCLYG LDTNEKLPSS FRSGPTEGHE 540 HCQWLNSDGT NVKNFSLSLP EEVDSFKLSP YSSAMGTHSD YYTSLFEQGQ TGTHDSDISL 600 TVAQKQKFTI REISPEWGYA TEATKVIIVG SFLCDPSESA WSCMFGDVEV PAQIIQDGVL 660 RCEAPPHLFG KVTICITSSN RVSCSEVREF EYRVKSSSGT NHSPPPETTK SAEELLLLVR 720 FVQTLLSDSS MQNRDGVEPE TLRRLKADDD SWGSIIEALL LGSGSASSNI YWLLEELLKD 780 KLQQWLSSRS HGLDQTGCSL SKKEQGIIHM VAGLGFEWAL NSILSCGVNI NFRDINGWTA 840 LHWAARFGRE KMVAVLVASG ASAGAVTDPN SQDPIGKTPA SIAAITQAAA RIQSAFRAHS 900 FRKRQQKEAG ISIDDYGISS DDIQGLSAMS KLAFRNPRDY NSAAVSIQKK YRGWKSRKDF 960 LALRQKVVKI QAHVRGYQVR KHYKVICWAV GILDKVVLRW RRKGVGLRGF RHETQSSEER 1020 EDEDILKVFR KQKVDGAIDE AVSRVLSMVE SPEARQQYHR MLERYHQAKA ELGGTSGEAD 1080 VPNSLDDTFN IEDIDMYQFP

Sequence ? help Back to Top

Protein Sequence Length: 1100 aa Download sequence

MLNDENNPPF RSRYPSIPLL RGICRCCSGL SIIPGKYTIS GLDICTHDAN REASNFEAMA  60
RFSAGQLVFA TSSEHEASWR QVAQDSNSPL LCLRPFVPDF LVVVSFTIHL VLVALVSVDY  120
FPFEAEAPSS RPTLGQQRAH LVVLVDANEH KSNAFSAVRR QVLIFRQSLN MMQSGFNIDD  180
LFQEAQTRWL KPAEVLSILQ NHEKFKLTPE PPQQPSSKSP FGGSLFLFNK RVLRFFRRDG  240
HHWRKKKDGR TVGEAHERLK VGNAETLNCY YAHGEDNPNF QRRSYWMLDP ASEHIVLVHY  300
REISEGKSST GSFAQSPVSS SSFSHSPSSK TTQNRGSISI ISDLREPYQN LSSPGSVEVN  360
SDVAIKKNGR ENPDKLYGTG ESDSSAKFDV SQALRRLEEQ LSLNEDSFDE FVDDNPNSDI  420
MDRFNEFLDD TNGSDILEDH SDMTNQDQFT AFHGPEYVVH DQFYGGRAQM QGNANNSGEH  480
SQFIGQEFAD RNKESAPWKE VLDSCKPSSV VEPKEKCLYG LDTNEKLPSS FRSGPTEGHE  540
HCQWLNSDGT NVKNFSLSLP EEVDSFKLSP YSSAMGTHSD YYTSLFEQGQ TGTHDSDISL  600
TVAQKQKFTI REISPEWGYA TEATKVIIVG SFLCDPSESA WSCMFGDVEV PAQIIQDGVL  660
RCEAPPHLFG KVTICITSSN RVSCSEVREF EYRVKSSSGT NHSPPPETTK SAEELLLLVR  720
FVQTLLSDSS MQNRDGVEPE TLRRLKADDD SWGSIIEALL LGSGSASSNI YWLLEELLKD  780
KLQQWLSSRS HGLDQTGCSL SKKEQGIIHM VAGLGFEWAL NSILSCGVNI NFRDINGWTA  840
LHWAARFGRE KMVAVLVASG ASAGAVTDPN SQDPIGKTPA SIAAITQAAA RIQSAFRAHS  900
FRKRQQKEAG ISIDDYGISS DDIQGLSAMS KLAFRNPRDY NSAAVSIQKK YRGWKSRKDF  960
LALRQKVVKI QAHVRGYQVR KHYKVICWAV GILDKVVLRW RRKGVGLRGF RHETQSSEER  1020
EDEDILKVFR KQKVDGAIDE AVSRVLSMVE SPEARQQYHR MLERYHQAKA ELGGTSGEAD  1080
VPNSLDDTFN IEDIDMYQFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-147	CAMTA family protein