PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000055.1_g240.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 359aa MW: 39894.3 Da PI: 6.5049 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 92.7 | 2.7e-29 | 109 | 191 | 1 | 81 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 f+k ltpsdv+k++rlv+pk++ae++ gg+ ++ l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v Pav_sc0000055.1_g240.1.mk 109 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgGGD--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVV 190 99***************************7666..6679*******************************************98 PP E CS B3 81 v 81 + Pav_sc0000055.1_g240.1.mk 191 L 191 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MSINHFSSDH PETQWWPNTA HHQQQQDPSR AHFLPQFYQD THHHNYQAWL NSQEQPTPMS 60 PTPPTPTTLN FNLNQNDAES DHTNQLQHQL LLQSSPPLDD HDEENEPMFE KPLTPSDVGK 120 LNRLVIPKQH AEKYFPLGGG DSGLLLSFED ESGKSWRFRY SYWNSSQSYV LTKGWSRYVK 180 EKRLDAGDVV LRRSAAATPS AHDSGPGPAQ VSGGAGESSG SGSAGGWTRM FYSAPHHNNN 240 DGGSSYPAHQ YHNHSVAPYP PDCLHAAGPG VQNMSQTTSS VGSSKILRLF GVNLECQQQA 300 DHESEPSTPD GSSSLSMSSS QGPTPHHHLY PRAAYDYAAE QRVRVPLKTT FTNYPNHYC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36080.1 | 9e-47 | B3 family protein |