PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000055.1_g240.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 359aa MW: 39894.3 Da PI: 6.5049

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000055.1_g240.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	92.7	2.7e-29	109	191	1	81
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 f+k ltpsdv+k++rlv+pk++ae++ gg+ ++ l++edesg+sW+++++y+++s++yvltkGW+++vk+++L++gD+v Pav_sc0000055.1_g240.1.mk 109 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgGGD--SGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVV 190 99*************************7666..6679*****************************************98 PP E CS B3 81 v 81 + Pav_sc0000055.1_g240.1.mk 191 L 191 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MSINHFSSDH PETQWWPNTA HHQQQQDPSR AHFLPQFYQD THHHNYQAWL NSQEQPTPMS 60 PTPPTPTTLN FNLNQNDAES DHTNQLQHQL LLQSSPPLDD HDEENEPMFE KPLTPSDVGK 120 LNRLVIPKQH AEKYFPLGGG DSGLLLSFED ESGKSWRFRY SYWNSSQSYV LTKGWSRYVK 180 EKRLDAGDVV LRRSAAATPS AHDSGPGPAQ VSGGAGESSG SGSAGGWTRM FYSAPHHNNN 240 DGGSSYPAHQ YHNHSVAPYP PDCLHAAGPG VQNMSQTTSS VGSSKILRLF GVNLECQQQA 300 DHESEPSTPD GSSSLSMSSS QGPTPHHHLY PRAAYDYAAE QRVRVPLKTT FTNYPNHYC

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MSINHFSSDH PETQWWPNTA HHQQQQDPSR AHFLPQFYQD THHHNYQAWL NSQEQPTPMS  60
PTPPTPTTLN FNLNQNDAES DHTNQLQHQL LLQSSPPLDD HDEENEPMFE KPLTPSDVGK  120
LNRLVIPKQH AEKYFPLGGG DSGLLLSFED ESGKSWRFRY SYWNSSQSYV LTKGWSRYVK  180
EKRLDAGDVV LRRSAAATPS AHDSGPGPAQ VSGGAGESSG SGSAGGWTRM FYSAPHHNNN  240
DGGSSYPAHQ YHNHSVAPYP PDCLHAAGPG VQNMSQTTSS VGSSKILRLF GVNLECQQQA  300
DHESEPSTPD GSSSLSMSSS QGPTPHHHLY PRAAYDYAAE QRVRVPLKTT FTNYPNHYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36080.1	9e-47	B3 family protein