PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000044.1_g810.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

DBB

Protein Properties

Length: 229aa MW: 25370.1 Da PI: 8.236

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000044.1_g810.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.1	3e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++ fC ++ lC+ C ++ H Pav_sc0000044.1_g810.1.mk 4 LCDSCESAAAIVFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	27.3	7.7e-09	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 e ++C+ +e+ ++ ++Ce +++ lC +C + H g H Pav_sc0000044.1_g810.1.mk 52 EVPRCDICENAPAFFYCEIDGSSLCLQCDMVVHVGgkrtH 91 789***************************9996544555 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MRTLCDSCES AAAIVFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLATP SEVPRCDICE 60 NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HGRYLVLRQR VEFPGDKPGN VDDPASQPVD 120 PGETRRVQHQ PPRMTIGENQ QNHRASPIRI SDANADGHVK MDTKLIDLNM KPHRMHEQAS 180 NKEVRVFSVF SGLMQHIRKH QLLQITSPVA GRVLHHMPRL SAASSGAFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	3e-78	DBB family protein