PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000044.1_g610.1.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WOX
Protein Properties Length: 305aa    MW: 33845.9 Da    PI: 6.3109
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000044.1_g610.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.66.1e-203091257
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               ++R+t+t++q+++L++l+++   r psae++++++++l    +++ ++V++WFqN++a+e++
  Pav_sc0000044.1_g610.1.mk 30 STRWTPTSDQIRILKDLYYNngVRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 91
                               58*****************8678*************************************97 PP

2Wus_type_Homeobox113.51.1e-362993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
  Pav_sc0000044.1_g610.1.mk 29 SSTRWTPTSDQIRILKDLYYnNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 93
                               789***************9779*****************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEPQQTQQQP NEDGSNKGTS GTNFLCRQSS TRWTPTSDQI RILKDLYYNN GVRSPSAEQI  60
QRISARLRQY GKIEGKNVFY WFQNHKARER QKKRFIDVPA PPIMQRSGLG INNNAPTAYE  120
PINHSNKYPN ISASAGVSSA SASSAGVIAV GQMGSYGYGS MTMEKSFRDC SISAAGGTSS  180
GHVGGSNNNI GHNVGSWVGV DPYSSPYTLF DKRSSSRQVF GDQENMMDEE DHEYQENLQD  240
SPEIETLPLF PMHGEDIHGF GNIKSTSDSY YSGWYRSDEG NNGRTSLELS LNSYGHMTPD  300
YFSSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-48WOX family protein