PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000040.1_g510.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 1454aa MW: 164017 Da PI: 6.6989

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000040.1_g510.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	92.5	7.1e-29	432	594	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLp.k..................kvkaeeke 57 lp+G++F+P+d el+ e+L++k+ + + ++e+i+++d iy+ +P +Lp k k++ ++ Pav_sc0000040.1_g510.1.mk 432 LPAGVKFDPSDAELL-EHLAAKCGVGNskphMFIDEFIPTLDgdngIYYDHPANLPgKelpsftflipcshlytgpGSKNDGSS 514 799**********.999999876664555444456777766677******648999*99988776655556678 PP NAM 58 wyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +fF+k+ ++yatg+rk+r+ +++ +W++tgk+k++++ +g ++g+kk++v+y +++ +k+ k++Wvmh+y+l Pav_sc0000040.1_g510.1.mk 515 FHFFHKTINAYATGHRKRRKvdchrslaAEHVRWHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGSKADKSNWVMHQYHL 594 8**************86888888877999********.999*******4334667888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1454 aa Download sequence
MGSGNGVYSV GDFNLDAKWL IDPKHLFVGP RIGEGAHAKV YEGKYKNQTV AVKIVHRGET 60 PEEIAKRESR FAREVAMLSK VQHKNLVKFI GACKEPVMVI VTELLLGGTL RKYLFSMRPR 120 CLDIRVAVGF ALDIARAMEC LHSHGIIHRD LKPDHKTVKL ADFGLAREES LTEMMTAETG 180 TYRWMAPELY STVTLRHGEK KHYNHKVDAY SFAIVLWELI HNKLPFEGMS NLQAAYAAAF 240 KNVRPSAENL PEDLALIVTS CWKEDPNDRP NFTQIIQMLL HYLSTISAPE PAIPQRIFRS 300 ENAVLPPESP GTSSLMPTHD DSGETPKTNV EEKPKASLTE PKPRNRFSQP WSLPVYPFRK 360 KAPQRKASAT KDSTPEAEAR AWLINSRGLA NKVKNAARSS AYQIKDCGAN RDCPNCHFVI 420 DNSDVLSEWP GLPAGVKFDP SDAELLEHLA AKCGVGNSKP HMFIDEFIPT LDGDNGIYYD 480 HPANLPGKEL PSFTFLIPCS HLYTGPGSKN DGSSFHFFHK TINAYATGHR KRRKVDCHRS 540 LAAEHVRWHK TGKTKPIMEN GVQKGCKKIM VLYKSSKKGS KADKSNWVMH QYHLGTEDGE 600 KEGEYVVSKI FYQQHKQSET NDNNLVIEDD VNALGTSPRT PITSAPNPPR PGNSVGCDDV 660 PDEDMLHSSA KEAELVPGTQ FEDNIGDNNW LAGESQADEN CDLDCLEDTL LCKETFDSST 720 LLNGSFADRI SSTDFPSNIY GVTGNSSTSC GIGDFENIDL GTPPDFQLAV MSDDGRASGN 780 NMEFPILSNP RVHLNGIFTY IFFNGNKEIS FAFGDARIFP LPSATINVRY EEPQQALLEV 840 RLFSPPIQSL QLLFSIVYRN VFSLRDVSAK LLSSNVVQPS KPSEDCFFSS FTPSNPFDGW 900 CRSMSTSRGS SSRGSSMRSK VAKRMQKESG KTLREVRRAK KLQKKLMTES ERLIYNLKRA 960 KRKVALLLQK LKKYELPDLP APRHDPELLT LEQLQAFKKI GFRNKNYVPV GVRGVFGGVV 1020 QNMHLHWKFH ETVQVCCDNF PKEKIKEMAT MLARLSGGVV INIHNVKTII MFRGRNYRQP 1080 KNLIPFNTLT KRKKDGSPYV FRGDKLSAAE PDNKLKHSDP PDEEEEEELD KFIAEIEDAA 1140 EREWAAEEAA EKEEQTRLRY WNKEQFGGRY RRSEDVENDD SDDGTARARG WRDTHGKQRP 1200 NDSDYEDDEE ESDSSNVVDA SVLDSDADES DGKPEKFKVS TRDRGKQDKF GRAKNDERFK 1260 KNREANNTKA SSRKIIVDEG TESENMLSDL DTVMWKSDSE EEHDSNASRA VNYDFRSSSD 1320 EEEGLSYMRG ERKKLANDLD KAHDKFEVSR NAQGKHHRIG RADNNDYLKR NGDVNVRRKL 1380 VEEDVVSENT FGASESAIWE LEAVEDVGAP TAGRYNYKSS DEEDYQVRRV EKKVKDTNKS 1440 TRTTKELDED WDSD

Sequence ? help Back to Top

Protein Sequence Length: 1454 aa Download sequence

MGSGNGVYSV GDFNLDAKWL IDPKHLFVGP RIGEGAHAKV YEGKYKNQTV AVKIVHRGET  60
PEEIAKRESR FAREVAMLSK VQHKNLVKFI GACKEPVMVI VTELLLGGTL RKYLFSMRPR  120
CLDIRVAVGF ALDIARAMEC LHSHGIIHRD LKPDHKTVKL ADFGLAREES LTEMMTAETG  180
TYRWMAPELY STVTLRHGEK KHYNHKVDAY SFAIVLWELI HNKLPFEGMS NLQAAYAAAF  240
KNVRPSAENL PEDLALIVTS CWKEDPNDRP NFTQIIQMLL HYLSTISAPE PAIPQRIFRS  300
ENAVLPPESP GTSSLMPTHD DSGETPKTNV EEKPKASLTE PKPRNRFSQP WSLPVYPFRK  360
KAPQRKASAT KDSTPEAEAR AWLINSRGLA NKVKNAARSS AYQIKDCGAN RDCPNCHFVI  420
DNSDVLSEWP GLPAGVKFDP SDAELLEHLA AKCGVGNSKP HMFIDEFIPT LDGDNGIYYD  480
HPANLPGKEL PSFTFLIPCS HLYTGPGSKN DGSSFHFFHK TINAYATGHR KRRKVDCHRS  540
LAAEHVRWHK TGKTKPIMEN GVQKGCKKIM VLYKSSKKGS KADKSNWVMH QYHLGTEDGE  600
KEGEYVVSKI FYQQHKQSET NDNNLVIEDD VNALGTSPRT PITSAPNPPR PGNSVGCDDV  660
PDEDMLHSSA KEAELVPGTQ FEDNIGDNNW LAGESQADEN CDLDCLEDTL LCKETFDSST  720
LLNGSFADRI SSTDFPSNIY GVTGNSSTSC GIGDFENIDL GTPPDFQLAV MSDDGRASGN  780
NMEFPILSNP RVHLNGIFTY IFFNGNKEIS FAFGDARIFP LPSATINVRY EEPQQALLEV  840
RLFSPPIQSL QLLFSIVYRN VFSLRDVSAK LLSSNVVQPS KPSEDCFFSS FTPSNPFDGW  900
CRSMSTSRGS SSRGSSMRSK VAKRMQKESG KTLREVRRAK KLQKKLMTES ERLIYNLKRA  960
KRKVALLLQK LKKYELPDLP APRHDPELLT LEQLQAFKKI GFRNKNYVPV GVRGVFGGVV  1020
QNMHLHWKFH ETVQVCCDNF PKEKIKEMAT MLARLSGGVV INIHNVKTII MFRGRNYRQP  1080
KNLIPFNTLT KRKKDGSPYV FRGDKLSAAE PDNKLKHSDP PDEEEEEELD KFIAEIEDAA  1140
EREWAAEEAA EKEEQTRLRY WNKEQFGGRY RRSEDVENDD SDDGTARARG WRDTHGKQRP  1200
NDSDYEDDEE ESDSSNVVDA SVLDSDADES DGKPEKFKVS TRDRGKQDKF GRAKNDERFK  1260
KNREANNTKA SSRKIIVDEG TESENMLSDL DTVMWKSDSE EEHDSNASRA VNYDFRSSSD  1320
EEEGLSYMRG ERKKLANDLD KAHDKFEVSR NAQGKHHRIG RADNNDYLKR NGDVNVRRKL  1380
VEEDVVSENT FGASESAIWE LEAVEDVGAP TAGRYNYKSS DEEDYQVRRV EKKVKDTNKS  1440
TRTTKELDED WDSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	2e-81	NAC family protein