PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000029.1_g070.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 350aa MW: 39162.2 Da PI: 8.607 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.7 | 8.1e-52 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 lppGfrF Ptdeel+v+yL++kv+g +++l ++i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWk Pav_sc0000029.1_g070.1.mk 14 LPPGFRFYPTDEELLVQYLCRKVAGYQFSL-QIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWK 96 79***************************9.89***************7777799***************************** PP NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 atg+dk +++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl Pav_sc0000029.1_g070.1.mk 97 ATGTDKIITT-EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139 ******9999.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MGVPETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGYQ FSLQIIAEID LYKFDPWVLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLI EPSRKNGSTK LDEWVLCRIY KKSSSSAAQK PMTTSVSSKE 180 HSNGSSSSCS SQLDDVLEWL PEIDDRCFTL PRINSLKTLQ QQEDSKLGFQ MGSGNFDWAS 240 LAGLNVVPEL CPNNQPQQGQ GQMNVNYSNN DMYVPSIPPL CHVESPPERL AKTVDEEVQS 300 GFRTQRVDNS GVFQNSNVMP QNFCNPTAPY GYGTRFGRSG LGFGGGEKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 1e-128 | NAC family protein |