PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000028.1_g520.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 167aa    MW: 18538 Da    PI: 3.8712
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000028.1_g520.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.7e-093767131
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                               rg+WT eEd+ l ++++ +G g+W++ ar+ 
  Pav_sc0000028.1_g520.1.mk 37 RGPWTVEEDLALMNYIANHGEGRWNSLARCA 67
                               89**************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MDAVKGGGRG CNHSLSASAT IENDIHEEAE DQMDLRRGPW TVEEDLALMN YIANHGEGRW  60
NSLARCADSF GAQVSPVSDL TDYYTPTTTA TTTISVNNNP TPDNYLVQAN HQVGSYDQCF  120
NPGLGSEHFQ GMEQQDNYQW GVDGGDISDN LWNVEDMWFL QEQLSNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.11e-18MYB family protein