PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000017.1_g1340.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 700aa MW: 80540.2 Da PI: 8.7901

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000017.1_g1340.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.5	9.3e-18	14	95	4	90
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 n+YA + GFs+rk + ++ +n+ i +r++ Csk+g+ ++ + + ++ trtgC+a ++ + + dg+w++++++++HnHe Pav_sc0000017.1_g1340.1.br 14 NSYALKKGFSIRKGNIQRDAKNN-IRQRDYLCSKQGFYDDLCEV---KTVHQLDTRTGCRALIRFTVD-DGVWKISHINSDHNHE 93 89*************997776.*********9997665...888999**********9.*************9 PP FAR1 89 la 90 +a Pav_sc0000017.1_g1340.1.br 94 FA 95 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 700 aa Download sequence
MEVCNEVQAY NLCNSYALKK GFSIRKGNIQ RDAKNNIRQR DYLCSKQGFY DDLCEVKTVH 60 QLDTRTGCRA LIRFTVDDGV WKISHINSDH NHEFAKLEER QFLKSSRKIQ KAHANVISSM 120 VEAGIRPTES YSYLAKEVGG SENVGFTKKD CLNYLHRKKE ELIEGGDAQS LINHFKHKQA 180 EDPNFFYSVQ VDQCTRMMNF FWRDGRSKLD YDCFGDVLCF DTTFRTNKYN LICAPFVGVN 240 HHWKNVLLGC AFLLDESTKS FVWLFETFLE SMGNKHPITI FTDEDKAMAN AIEIVFPQTC 300 HRLCTWHIAK NATQPLAGLY TNPEFSKYFS KCSYGCLSES EFEDTWDHMI KTFKLENHSW 360 LQKLYSLRRK WCSAFNLDDF SANIRSTQRV ESTNNIFHQI STKTMSLTSF VQHYEQKTAD 420 MRLAKLEDDF HCKNGMPHLK AKSGIFKKAA SEYTIKIFSF FEKELLGCFE VRLDEVCNVG 480 AKYVFEAIEE GQEKVYKIHF DSITFNISCS CKLFETKELL CRHALKVLDS KNITSVPSQY 540 ILKRWTKGAK KGIVVNNDLC ESYNKKARSA QSMCLSELMH EANNVVSIAS LSDSGTRLVK 600 QKLAEVMMLL ESDMEITRSK ENLNSIGDQT LHDVLIAKPP VLNPPTIRAK GITNARIKSQ 660 LEKKRKKEKK KDARVGNSSR TSRPTTMAAS KNYFLQVVFN

Sequence ? help Back to Top

Protein Sequence Length: 700 aa Download sequence

MEVCNEVQAY NLCNSYALKK GFSIRKGNIQ RDAKNNIRQR DYLCSKQGFY DDLCEVKTVH  60
QLDTRTGCRA LIRFTVDDGV WKISHINSDH NHEFAKLEER QFLKSSRKIQ KAHANVISSM  120
VEAGIRPTES YSYLAKEVGG SENVGFTKKD CLNYLHRKKE ELIEGGDAQS LINHFKHKQA  180
EDPNFFYSVQ VDQCTRMMNF FWRDGRSKLD YDCFGDVLCF DTTFRTNKYN LICAPFVGVN  240
HHWKNVLLGC AFLLDESTKS FVWLFETFLE SMGNKHPITI FTDEDKAMAN AIEIVFPQTC  300
HRLCTWHIAK NATQPLAGLY TNPEFSKYFS KCSYGCLSES EFEDTWDHMI KTFKLENHSW  360
LQKLYSLRRK WCSAFNLDDF SANIRSTQRV ESTNNIFHQI STKTMSLTSF VQHYEQKTAD  420
MRLAKLEDDF HCKNGMPHLK AKSGIFKKAA SEYTIKIFSF FEKELLGCFE VRLDEVCNVG  480
AKYVFEAIEE GQEKVYKIHF DSITFNISCS CKLFETKELL CRHALKVLDS KNITSVPSQY  540
ILKRWTKGAK KGIVVNNDLC ESYNKKARSA QSMCLSELMH EANNVVSIAS LSDSGTRLVK  600
QKLAEVMMLL ESDMEITRSK ENLNSIGDQT LHDVLIAKPP VLNPPTIRAK GITNARIKSQ  660
LEKKRKKEKK KDARVGNSSR TSRPTTMAAS KNYFLQVVFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	663	667	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-120	FAR1 family protein