PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_co4024673.1_g010.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TALE | ||||||||
Protein Properties | Length: 238aa MW: 27190.5 Da PI: 10.0081 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.8 | 4.9e-10 | 106 | 143 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + Pav_co4024673.1_g010.1.mk 106 FEHflHPYPTDSDKLMLAKQTGLSRSQVSNWFINARVR 143 664459******************************98 PP | |||||||
2 | BELL | 60.8 | 3.3e-20 | 1 | 43 | 30 | 72 |
BELL 30 lqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +q+v+ sFe vaglg+a+pY++lA ka++rhF+cLk+ai++q+ Pav_co4024673.1_g010.1.mk 1 MQAVVTSFEYVAGLGNAAPYANLAIKAMTRHFKCLKNAITDQL 43 9***************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MQAVVTSFEY VAGLGNAAPY ANLAIKAMTR HFKCLKNAIT DQLQFRNRDA TQLSHGKDES 60 QMLRNTRGFY NQRSIHNSDF VEHQPVWRPQ RGLPERAVTV LRAWLFEHFL HPYPTDSDKL 120 MLAKQTGLSR SQVSNWFINA RVRLWKPMVE EIHTLETRQA QKTSQRGDQS ANRSIDDHLP 180 SPNSLASENP STTTHRVQDS LSKRTRNELP DHITMGSSTD QLNLSCNNLP SHMHVGHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02030.1 | 4e-70 | TALE family protein |