PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4008557.1_g010.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 245aa    MW: 28308.7 Da    PI: 7.1296
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4008557.1_g010.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.61.8e-1771411128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr 76 
                                +p GfrF+Ptd+e+v  +L+  + ++k    + +++i+ +d+  +k+eP+++ +k+ +    ++++yf s  +k ++  kr  r
  Pav_co4008557.1_g010.1.br   7 VPLGFRFRPTDQEIVGSFLHTLLVERKplmPPYSNFIRACDLfgNKLEPSEIWNKYGGpqlVDQDLYFLSGLKKLTP--KRMDR 88 
                                589******************988877787666778*****833589*****7544333335668888888877655..68888 PP

                        NAM  77 .atksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 + + g+W++t + k v +   + + +g k+ + + +  + + e+t+W+++ey l
  Pav_co4008557.1_g010.1.br  89 sVGQGGTWSETESFKLVEDDneNPNPIGRKRKFRYEN--KGSEEHTRWLLDEYGL 141
                                677899*******9999997444455********984..334469********75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MAHHQNVPLG FRFRPTDQEI VGSFLHTLLV ERKPLMPPYS NFIRACDLFG NKLEPSEIWN  60
KYGGPQLVDQ DLYFLSGLKK LTPKRMDRSV GQGGTWSETE SFKLVEDDNE NPNPIGRKRK  120
FRYENKGSEE HTRWLLDEYG LFVGPKNDYN DRSYDFDFVI CRMRKNDRAL SKEINLKRSS  180
QDQVQKKRST NKKMKKDHQM GSPAESSSHV EQGCSSSLTG GELVVSYDDV DPTDPTFFED  240
NPIFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.18e-08NAC family protein