PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_co4008119.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 94aa    MW: 10592.4 Da    PI: 11.6611
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_co4008119.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.62e-171711785
                               E--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                         B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkld 85
                               ++p kfa+++g++ ++   ++l+d+sgrsW + ++      ++s r+  +kGW +F +an+Lk gD+++F l+
  Pav_co4008119.1_g010.1.mk  1 TIPAKFARTNGIVAAS--RIILKDPSGRSWPLIISKwermGRRSHRIAARKGWYKFYEANKLKNGDVCIFNLK 71
                               59*********99777..6***************7745444444458899********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
TIPAKFARTN GIVAASRIIL KDPSGRSWPL IISKWERMGR RSHRIAARKG WYKFYEANKL  60
KNGDVCIFNL KPVSSKSGSK STRVLEVQIT RCGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.12e-09B3 family protein