PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON80774.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | C2H2 | ||||||||
Protein Properties | Length: 529aa MW: 58414.3 Da PI: 5.4469 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 20.9 | 9.5e-07 | 275 | 296 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +Cgk F+r nL+ H+r H PON80774.1 275 FCAICGKGFKRDANLRMHMRGH 296 6*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence |
MDLEEELCAG EWGNSSSGNE LTKELSSDHP SYSDFSSQQC QQKWDNASMI GFGIGIETSF 60 QGYGRPSVVQ GGVPLSLNNQ AKILGQEDVQ MHDIQQTNKI PDWDPNAMLN NLSLLEEKIH 120 QLQDLVQLIA GRRGQVLGQP DELVFQQQQL VTADLTSIIA QLISTAGSLL PSVKNTLPAV 180 VPSTVQLGQP GRVNLAPELR MNDDVQPQKN GGSKTSEESN QTDMTGNYVA EHNNLLDEHE 240 LKDEEDADEG ENLPPGTYEI LQLEKEEILA PHTHFCAICG KGFKRDANLR MHMRGHGDEY 300 KTPAALAKPH KDPGSEPVVI KRYSCPYAGC KRNKDHKKFQ PLKTILCVKN HYKRTHCDKS 360 YTCSRCNIKK FSVIADLKTH EKHCGKDKWL CSCGTTFSRK DKLFGHIALF QGHIPAIPLD 420 EARGNVGPAD HPTEIEATNK GSVNSVNFNF RSTTPGEAVA QDIMDLNGGL DDPTACFSPL 480 NFENCNFGGF HEFPRPPFED SESSFSFLLS GSCSYPPKTR GESSSNNLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34370.2 | 1e-172 | C2H2 family protein |