PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON80525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MYB | ||||||||
Protein Properties | Length: 292aa MW: 33105.9 Da PI: 5.1171 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.8 | 8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd++l+ +v+++G +W+ ++ g+ R++k+c++rw +yl PON80525.1 14 RGAWSSEEDDKLKAYVERYGHWNWRELPKFAGLSRCGKSCRLRWMNYL 61 89******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 58.6 | 1.4e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+ l++++++++G++ W+ Ia++++ gRt++++k++w+++l PON80525.1 67 RGNYTAEEESLIIKLHEEHGNK-WSMIAAKLP-GRTDNEIKNHWHTHL 112 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MVRAPFYDKY GVKRGAWSSE EDDKLKAYVE RYGHWNWREL PKFAGLSRCG KSCRLRWMNY 60 LRPDVKRGNY TAEEESLIIK LHEEHGNKWS MIAAKLPGRT DNEIKNHWHT HLEKRSKFTH 120 HDDDPDQKPK KSETKDLYSS EYSSGGDRNS HGESEAQSNS SATAPPDIAG LSPQILESSQ 180 YSHTETTSST STGSSSSTSS SSTSRATDEL VSTTNSTNDV SEDSTTHHDP SKLEKLSIQD 240 QYCGGDFWTE PFLDDNNVMS IQNEYYPACF AEEGILSSYN ISFYDEGMDY LL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 6e-57 | MYB family protein |