PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON79733.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 261aa MW: 29452.3 Da PI: 8.3165 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.6 | 2.5e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs +gklye++s PON79733.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSARGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 90.5 | 3.2e-30 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 l +++es +qe+ +Lk+++e L+r+qR+llGedLe L lk+L qLe++L++slk+iRs+K +++++++++l+ ke+ l e+n++L++klee PON79733.1 82 LPGKDTESNYQEYLRLKAKVEVLRRTQRNLLGEDLEHLGLKDLGQLEHKLDTSLKQIRSTKIQHMIDELSHLRGKEETLVETNNELKRKLEE 173 6778899**********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSA RGKLYEFCSG 60 SSMAKTLEKY ERCSYGAQEG KLPGKDTESN YQEYLRLKAK VEVLRRTQRN LLGEDLEHLG 120 LKDLGQLEHK LDTSLKQIRS TKIQHMIDEL SHLRGKEETL VETNNELKRK LEEISGLIHQ 180 PSEAREQNVT YTHHPAQPVE LSFEPLQRNN NSSSNNNTIE LHIGSYGTIN SGIGDQVNVA 240 AANTVPNLMA SNSVDRGCFD L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 3e-84 | MIKC_MADS family protein |