PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON79174.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 572aa MW: 61265.7 Da PI: 9.3753

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON79174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	2.9e-05	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H PON79174.1 74 FICEVCNKGFQREQNLQLHRRGH 96 89*******************88 PP
2	zf-C2H2	13.2	0.00027	150	172	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ PON79174.1 150 WKCEKCSKRYAVQSDWKAHSKTC 172 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MAAASSSSVP GFGINREEDQ NQMKQQHSST PTNSSSLAPA PPSQKKKRNQ PGTPNPDAEV 60 IALSPNTLMA TNRFICEVCN KGFQREQNLQ LHRRGHNLPW KLKQKTNKEP KRKVYLCPEP 120 TCVHHDPSRA LGDLTGIKKH YSRKHGEKKW KCEKCSKRYA VQSDWKAHSK TCGTREYRCD 180 CGTLFSRDGG STGGVLTRRD SFITHRAFCD ALAQESARHP PNLSAIGANL YGGSNATSLG 240 LSQLGPQFSA LQDQTNQSGE ILRLGGASHH RSAPQPSTGQ FDHGHILSPA SFRSQQQPSA 300 AFFLPAEPNQ QYHHQEEHHH QQAQHGFLPN KPFHGLMQFS ELQSNANNVN PSTGLLISDH 360 FNALNGASGG GGGGGEGSNI FSGHINVGDQ MSSGAVPSLY SQSVQTNHSA ALAVAHMSAT 420 ALLQKAAQMG STSSNNSTAS LLRTFGTSSS SSGGQNKPSD RQGIVAPATF GGGGGGLFGP 480 ENDQNNLQDL MNSFAAAGNS SMFGGNAFGG YEAANRGNLD HQEQKLQANS SGGFAAMNNN 540 IGSGSDRLTR DFLGVGQIVR SSRFMTWILE YM

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MAAASSSSVP GFGINREEDQ NQMKQQHSST PTNSSSLAPA PPSQKKKRNQ PGTPNPDAEV  60
IALSPNTLMA TNRFICEVCN KGFQREQNLQ LHRRGHNLPW KLKQKTNKEP KRKVYLCPEP  120
TCVHHDPSRA LGDLTGIKKH YSRKHGEKKW KCEKCSKRYA VQSDWKAHSK TCGTREYRCD  180
CGTLFSRDGG STGGVLTRRD SFITHRAFCD ALAQESARHP PNLSAIGANL YGGSNATSLG  240
LSQLGPQFSA LQDQTNQSGE ILRLGGASHH RSAPQPSTGQ FDHGHILSPA SFRSQQQPSA  300
AFFLPAEPNQ QYHHQEEHHH QQAQHGFLPN KPFHGLMQFS ELQSNANNVN PSTGLLISDH  360
FNALNGASGG GGGGGEGSNI FSGHINVGDQ MSSGAVPSLY SQSVQTNHSA ALAVAHMSAT  420
ALLQKAAQMG STSSNNSTAS LLRTFGTSSS SSGGQNKPSD RQGIVAPATF GGGGGGLFGP  480
ENDQNNLQDL MNSFAAAGNS SMFGGNAFGG YEAANRGNLD HQEQKLQANS SGGFAAMNNN  540
IGSGSDRLTR DFLGVGQIVR SSRFMTWILE YM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-113	C2H2 family protein