PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON79006.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 269aa    MW: 29877.4 Da    PI: 8.6151
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON79006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.28.7e-1322104185
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                 +W++  + +Liea  ++  +l+rg+l++++W+ev++++       +  ++ +qCk++++ l+k+yk +k   +       s ++++ +l
  PON79006.1  22 CWSEGATSTLIEAWGDRYLQLNRGNLRQKDWKEVAEAVngrdNGAKSYKTDVQCKNRIDTLKKKYKLEKSKPIP------SAWAFYPRL 104
                 7*************************************995434444679****************99988775......357777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDRPGTAAAA ASRPQGGGRE DCWSEGATST LIEAWGDRYL QLNRGNLRQK DWKEVAEAVN  60
GRDNGAKSYK TDVQCKNRID TLKKKYKLEK SKPIPSAWAF YPRLDFLIGS DNKKPTTTST  120
TVNLTIKSGK LKPNSRPGPK LLAVKSPESS AGEEDDDDDD DDDDVDDNGG DGGGVGSGGK  180
VVMRKHRLEA VDISEGAAFR ELARAILKFG EIYERIESSK QQRIMELERQ RMEFAKDLEF  240
QRLNMFMDAQ LELQKANKRA KYAPGSGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.12e-69Trihelix family protein