PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON78799.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 360aa MW: 39655.9 Da PI: 7.5017 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.9 | 1.5e-17 | 177 | 231 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k PON78799.1 177 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 231 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 128.1 | 3.7e-41 | 177 | 267 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk PON78799.1 177 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELR-ALK 267 69*************************************************************************************9.555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MELGLSLGDP PKPPFGFIEK HQTNNDKPSS FCMDLSIGPL RPRTGEDING KRDQPDELTH 60 REQPRPDEIP RKSGSSSSEP PVQLDLLPHA PGGELWELNR VPKVVVPTRE EAAADETAGL 120 SSSPNSNSGG TSSFQMDIGL YSYGGSGGGK RDQYSEGEAE RASSRASDED DVNGNNRKKL 180 RLSKEQSAFL EESFKEHNTL NPKQKLALAK QLNLRPRQVE VWFQNRRART KLKQTEVDCE 240 YLKRCCETLT EENRRLHKEL QELRALKTSN PFYMQLPATT LTMCPSCERV ATTTTTGAAA 300 AAAGATTSTT ITTTTTINPS GNNYESSSKS VSSGFPSNRP KFYPFPQAQI QAQNHSHQSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 226 | 234 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 5e-72 | HD-ZIP family protein |