PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON78173.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family C2H2
Protein Properties Length: 334aa    MW: 35767 Da    PI: 10.2191
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON78173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021114136123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C++ Fs++  L  H++ H
  PON78173.1 114 FSCNFCKREFSTSQALGGHQNAH 136
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MKELVAEACP SEASSISAAS EGDENKKIMK MKMKMKENVK AGGKQISETD KPGPSSRLLL  60
DLKLSSDKSS APGGGSGSKM ELNLFNSHHV NPSSSPDQSN KEEKKPAEVQ TRVFSCNFCK  120
REFSTSQALG GHQNAHKQER ALAKRRQGID VGAFGHHPFS PYYPYSTNIS PHFPFYGSFN  180
RSPLGVRMDS MIHKPNSYPW STPVPGGYRL GHDLGSSGSV GGWSRQPPML NSAQRSIERL  240
NLEGFRSRNN GVGALGRLGG VTSSSTSFGT SSRIEDISGA LSNFGGSSST SAVTTSHVPI  300
NRPSIGVADL IRHSEPLKTD RSGATTGLDL SLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.17e-21C2H2 family protein