PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON78055.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 335aa    MW: 37836.5 Da    PI: 6.765
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON78055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3103.11.5e-3246151199
                 EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 f+k ltpsdv+k++rlv+pk++ae++         gg+  ++  l++edesg+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F++++ ++ 
  PON78055.1  46 FEKPLTPSDVGKLNRLVIPKQHAEKYfplgggdsvGGD--KGLLLSFEDESGKFWRFRYSYWNSSQSYVLTKGWSRYVKEKRLDAGDVVLFERHRADND 142
                 99****************************99988777..4568************************************************8877999 PP

                 ..EEEEE-S CS
          B3  91 elvvkvfrk 99 
                 +l+++++r+
  PON78055.1 143 RLFIGWRRR 151
                 9******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MSRTNSTAFA FNLNQYDNDA DDQNDVVLDE RHHHPSELDE MKEPMFEKPL TPSDVGKLNR  60
LVIPKQHAEK YFPLGGGDSV GGDKGLLLSF EDESGKFWRF RYSYWNSSQS YVLTKGWSRY  120
VKEKRLDAGD VVLFERHRAD NDRLFIGWRR RPAQDCAAME AAAAHISNGG DGGGESCNSN  180
NNNNSNSNTG WTRMFYSAHP YPTHPHCHHH LHHPAMPYQP DSLHAGYLGG CETRPSLNSK  240
REINSSIIVL ERSTVQNPTA SVSGNSKILR LFGVNLECHQ ADNNDDQSEP STPDGSSLSS  300
QGPAHHHQFY PPTYYSDHMD FTFSRDVKPM RNRRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.22e-54B3 family protein