PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON77928.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WOX

Protein Properties

Length: 406aa MW: 44698.6 Da PI: 7.6904

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON77928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.3e-18	55	115	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ PON77928.1 55 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 115 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.1	3e-36	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k PON77928.1 54 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MASSNRHWPS MFKSKPCNSH HQWQHDINPS LMSSGCHRAP YTSVSGCEER SPEPKPRWNP 60 KPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL 120 QSSKQQTPTP PSAATAHVTA PSSSSSSSSE KSSPKAPTRP FTVGFSNLVT EPDLNNNLNS 180 STSPTASANQ TIFQTSHEFF AHQPFFFPVV HYQSSATTTS TSQGFCFPHS HELSSGVVLP 240 HEVQNMGPCT SLLLNEIMNH HHHHHGVSKK DHDRHDKGLM KMDDPDLVNY TSLPPTTPSP 300 VATHNVVVSP HHHHATSGNT TVSAPSVPVN QIQGVGEEGT VGPGGAAKTT VFINDVAFEV 360 ATGPFNVREA FGEDAVLIHS YGQPVLTNDW GVTLHSLQHG AFYYLI

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MASSNRHWPS MFKSKPCNSH HQWQHDINPS LMSSGCHRAP YTSVSGCEER SPEPKPRWNP  60
KPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL  120
QSSKQQTPTP PSAATAHVTA PSSSSSSSSE KSSPKAPTRP FTVGFSNLVT EPDLNNNLNS  180
STSPTASANQ TIFQTSHEFF AHQPFFFPVV HYQSSATTTS TSQGFCFPHS HELSSGVVLP  240
HEVQNMGPCT SLLLNEIMNH HHHHHGVSKK DHDRHDKGLM KMDDPDLVNY TSLPPTTPSP  300
VATHNVVVSP HHHHATSGNT TVSAPSVPVN QIQGVGEEGT VGPGGAAKTT VFINDVAFEV  360
ATGPFNVREA FGEDAVLIHS YGQPVLTNDW GVTLHSLQHG AFYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	2e-63	WOX family protein