PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON77926.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | ERF | ||||||||
Protein Properties | Length: 195aa MW: 20837.2 Da PI: 9.5256 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.7e-19 | 82 | 133 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd ++ +r++lg+f taeeAa a+++a+ +++g+ PON77926.1 82 HYRGVRRRP-WGKYAAEIRD----SaRHgARVWLGTFETAEEAALAYDRAAFRMRGA 133 8********.**********....33236**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MVLASASSAQ TQSELPLNEN DSQDMVIYQV LNEASMSLNA TSFLPQRLHQ ITTTSSSNSI 60 PTQLVSSGLD QLPVRNIAMK KHYRGVRRRP WGKYAAEIRD SARHGARVWL GTFETAEEAA 120 LAYDRAAFRM RGAKALLNFP AEVVAAAAAA AAASHAQRVV QENGSANKSS DSIVTSRSES 180 ESSTSTGEGG TRPGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 7e-34 | ERF family protein |