PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON77332.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 879aa MW: 97327.9 Da PI: 9.0176

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON77332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.4	3.8e-23	787	867	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++qev++Li++r e+++r++ k++++lWee+s+ + + g++rsp qCk++w +l ++y+++k g+k++ +++pyf++++ PON77332.1 787 KWSNQEVKKLITMRGELHSRFQVVKKRMALWEEISRELLADGINRSPGQCKSRWTSLVQEYEETKSGKKSN-----KSWPYFEEMN 867 7******************************************************************84.....56*****7 PP

Sequence ? help Back to Top
Protein Sequence Length: 879 aa Download sequence
MVALGSLSLC PCSLLWRPKL PKRSVSCSLG SPNATGTPKS RAPRKRPGRK EGPRKSMEDS 60 VQRKMEQFYE GREGPPIRVL PIGGLGEIGM NCMLVGNYDR YILIDAGVMF PDYDELGVQK 120 IIPDTTFIKR WSHKIEAVVI THGHEDHIGA LPWVIPALDS NTPIFASSFT MELIRKRLKE 180 NGIFVSSRLK VFRTKRKFMA GPFEIEPLRV THSIPDCCGL VLRCADGTIL HTGDWKIDES 240 PLDGKVFDRE TLEELSKEGV TLMMSDSTNV LSPGRTVSES VVADALLRHI SAAKGRVITT 300 QFASNIHRLG SVKAAADLTG RKLVFVGMSL RTYLDAAFKD GKAPIDPSSL VKVEDIDAYA 360 PKDLLVVTTG SQAEPRAALN LASYGSSHSL KLNKEDLILY SAKVIPGNES RVMDMLNRIS 420 EIGSRIVMGK NEGLHTSGHA YRGELEEVLK VVKPQHFLPI HGELLFLKEH ELLGRSTGIR 480 HTTVIRNGEM LGVSHLRNRR VLSNGFTLLG KENLQLKYSD GDKAFGTSSE LCVDERLKIA 540 LDGIIVVSME ILRPQNVNGL FENTLKGKIR ITTRCLWLDK GKLIDALHKA ALAALSSCPV 600 NCPLSHMERT VSEVLRKLVR KYSGKRPEVI AIAVENPAAV ISDEVGARLS GKSHVGFEIS 660 ALKKKIDRRP NKSKSNRGQA EVEKRNSPLD INLQEDLGGD GVELEGLLPE EETTASSSDS 720 DIISSDSPES DEFWRSFTGS ALPVDGVVKE NNGSIMSEEQ ILELEKDGKE SIDATDSKPK 780 KPAKRNKWSN QEVKKLITMR GELHSRFQVV KKRMALWEEI SRELLADGIN RSPGQCKSRW 840 TSLVQEYEET KSGKKSNKSW PYFEEMNRVL SDSEAMAAK

Sequence ? help Back to Top

Protein Sequence Length: 879 aa Download sequence

MVALGSLSLC PCSLLWRPKL PKRSVSCSLG SPNATGTPKS RAPRKRPGRK EGPRKSMEDS  60
VQRKMEQFYE GREGPPIRVL PIGGLGEIGM NCMLVGNYDR YILIDAGVMF PDYDELGVQK  120
IIPDTTFIKR WSHKIEAVVI THGHEDHIGA LPWVIPALDS NTPIFASSFT MELIRKRLKE  180
NGIFVSSRLK VFRTKRKFMA GPFEIEPLRV THSIPDCCGL VLRCADGTIL HTGDWKIDES  240
PLDGKVFDRE TLEELSKEGV TLMMSDSTNV LSPGRTVSES VVADALLRHI SAAKGRVITT  300
QFASNIHRLG SVKAAADLTG RKLVFVGMSL RTYLDAAFKD GKAPIDPSSL VKVEDIDAYA  360
PKDLLVVTTG SQAEPRAALN LASYGSSHSL KLNKEDLILY SAKVIPGNES RVMDMLNRIS  420
EIGSRIVMGK NEGLHTSGHA YRGELEEVLK VVKPQHFLPI HGELLFLKEH ELLGRSTGIR  480
HTTVIRNGEM LGVSHLRNRR VLSNGFTLLG KENLQLKYSD GDKAFGTSSE LCVDERLKIA  540
LDGIIVVSME ILRPQNVNGL FENTLKGKIR ITTRCLWLDK GKLIDALHKA ALAALSSCPV  600
NCPLSHMERT VSEVLRKLVR KYSGKRPEVI AIAVENPAAV ISDEVGARLS GKSHVGFEIS  660
ALKKKIDRRP NKSKSNRGQA EVEKRNSPLD INLQEDLGGD GVELEGLLPE EETTASSSDS  720
DIISSDSPES DEFWRSFTGS ALPVDGVVKE NNGSIMSEEQ ILELEKDGKE SIDATDSKPK  780
KPAKRNKWSN QEVKKLITMR GELHSRFQVV KKRMALWEEI SRELLADGIN RSPGQCKSRW  840
TSLVQEYEET KSGKKSNKSW PYFEEMNRVL SDSEAMAAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	778	795	KPKKPAKRNKWSNQEVKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein