PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON77261.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SBP

Protein Properties

Length: 410aa MW: 45021.9 Da PI: 7.7802

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON77261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.1	9.1e-42	95	171	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v++C+adls++++yhrrhkvCe hsk+p+v+v g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ PON77261.1 95 CLVDDCNADLSNCRDYHRRHKVCELHSKTPQVTVGGEKQRFCQQCSRFHSLDEFDEGKRSCRKRLDGHNRRRRKPQP 171 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MEWNSKAPSW DFTDLEQESF FNLGTVNESN ISYGNDHKTI RENFSVDLKL GQVGNSDIDL 60 VDTWKEPRLP KHASSPSGSS KRSRGTYNGS QAVSCLVDDC NADLSNCRDY HRRHKVCELH 120 SKTPQVTVGG EKQRFCQQCS RFHSLDEFDE GKRSCRKRLD GHNRRRRKPQ PEPFTRYGSL 180 LSNYTSTQML PFSSSLVYPC TTIVNPNWGG VVVKTEADSG LHNPHQQLPF LDKHNMFLGS 240 NSPGTGPPSY KAAGSNKTSF PVLHGHSPTI NGQTTTPEVS VCYPHLRAFP SLSQTSEAPR 300 SKVFYDSLLT TTTTTTTTPK VQNSDCALSL LSSPQAQTSE IGLGHNIMSR ISSSVPLLGH 360 PTLQANGLEP IMSSVLVTNG SGTADVHCPG MFNTGSDGNE AHQTLHSHWG

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MEWNSKAPSW DFTDLEQESF FNLGTVNESN ISYGNDHKTI RENFSVDLKL GQVGNSDIDL  60
VDTWKEPRLP KHASSPSGSS KRSRGTYNGS QAVSCLVDDC NADLSNCRDY HRRHKVCELH  120
SKTPQVTVGG EKQRFCQQCS RFHSLDEFDE GKRSCRKRLD GHNRRRRKPQ PEPFTRYGSL  180
LSNYTSTQML PFSSSLVYPC TTIVNPNWGG VVVKTEADSG LHNPHQQLPF LDKHNMFLGS  240
NSPGTGPPSY KAAGSNKTSF PVLHGHSPTI NGQTTTPEVS VCYPHLRAFP SLSQTSEAPR  300
SKVFYDSLLT TTTTTTTTPK VQNSDCALSL LSSPQAQTSE IGLGHNIMSR ISSSVPLLGH  360
PTLQANGLEP IMSSVLVTNG SGTADVHCPG MFNTGSDGNE AHQTLHSHWG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	169	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	4e-61	SBP family protein