PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76995.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Trihelix
Protein Properties Length: 300aa    MW: 33456.3 Da    PI: 5.106
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.65e-1628118186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+++ + +Li+a  ++  +l+rg+l++++W++v++++     + ++ +r+ +qCk++++ ++k+yk +k++ ++ +   +s++ +fd+l+
  PON76995.1  28 CWSEEATSTLIDAWGRRYLDLNRGNLRQKDWQDVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKVEKARVSSSNGALTSSWTFFDRLD 118
                 7****************************************99999**************************9999888889*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGDATETLTP SSVPPSSHSR PMPVREDCWS EEATSTLIDA WGRRYLDLNR GNLRQKDWQD  60
VADAVNALHG HTKKTHRTDV QCKNRIDTIK KKYKVEKARV SSSNGALTSS WTFFDRLDVL  120
IGSNHKKPSP SLSPSPPVAV PLPPSYRKNS SAAAASGAAS AAAAAAVVLP QKRAALPADE  180
GFFRRNYSAM AAAAAAAEAE EDEDELENVE EVDEEEEEEE EDERDSEESG EEGMRMLARA  240
IARFGQVYEK VEAEKLRQMV ELEKQRMQFA KDLEVQRMRM FMDTQVQLER IKRGKRSGSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-41Trihelix family protein