PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON76886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | WOX | ||||||||
Protein Properties | Length: 233aa MW: 26017.2 Da PI: 4.8359 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.8 | 2.9e-21 | 91 | 151 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++t+ ql++Le+ Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ PON76886.1 91 RQRWSPTTLQLQILERIFEEgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 151 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 99.6 | 2.4e-32 | 90 | 153 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RW+Pt+ Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq PON76886.1 90 ARQRWSPTTLQLQILERIFEEGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 153 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MEKENPQKEG VVGAGAGAGA GVAAAGLYVK VMTDEQMELL RRQISVYTTI CEKLAEMHKA 60 ISARHDLSGM KLGALHCDPI MAYAGHKITA RQRWSPTTLQ LQILERIFEE GNGTPSKQKI 120 KEITSELSQH GQISETNVYN WFQNRRARSK RKQSVPAPNN MEPEAEAETE FLKDSTKPED 180 IESEDIEFYD NSAPRDHDVY FLSPEELISW SANGSVMELQ SVQSWGGFDV GEL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 145 | 153 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 1e-67 | WOX family protein |