PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON76792.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARF

Protein Properties

Length: 708aa MW: 77509.3 Da PI: 8.0164

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON76792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.8	8.8e-23	112	213	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++i+r++++r++lt+GW++Fv++++L +gD++vF +++++ PON76792.1 112 FAKTLTQSDANNGGGFSVPRYCAETIfpsldysADPPVQ--TVIAKDVHGEIWKFRHIFRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RTKTGDI 206 89**************************996555555..8********************************************..4588889 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ PON76792.1 207 CVGIRRA 213 **996 PP
2	Auxin_resp	113.3	2.3e-37	274	357	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa +a+++++Fev+Y+Pr st+eF+v+++ v++a++++++ GmRfkmafetedss++++ +Gt+++ + +dp+rWp+S+Wr+L+ PON76792.1 274 AAARAANGQPFEVIYYPRLSTPEFCVRASAVKAAMRIQWCSGMRFKMAFETEDSSRISWfMGTIASAQVADPIRWPHSPWRLLQ 357 67899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MNEVEKSLDP QLWQACAGGM VNIPPVNSRV FYFPQGHAEH AQAHVDFAQA SLRVPAFVLC 60 RVSAVKFMAD PDTDEVFANI RLVPLGNNEL DFEDDGVVGI DGSENPEKPT SFAKTLTQSD 120 ANNGGGFSVP RYCAETIFPS LDYSADPPVQ TVIAKDVHGE IWKFRHIFRG TPRRHLLTTG 180 WSNFVNQKKL VAGDSIVFLR TKTGDICVGI RRAKRGNCGP ETPSGWNNGS SYGGFSVFMR 240 EDENKMARNG CGSSSPGSNM RGTRKVRPEA VVEAAARAAN GQPFEVIYYP RLSTPEFCVR 300 ASAVKAAMRI QWCSGMRFKM AFETEDSSRI SWFMGTIASA QVADPIRWPH SPWRLLQVTW 360 DEPDLLQNVK RVSPWLIESI SNMPIIHLSS FSPPRKKLRF SQHPDFTLDG QFPVSSFLGN 420 PLGPSSPLCC LPDNTPAGIQ GARHALFGIS LSDLHLNNKL QPGLFSSSFQ QLNPHSGIPN 480 GLKRGHSNSN ESLSCLLTMG NSSPNMEKSD SVKGHQFVLF GQRILTEQQI SRSCSSDSVS 540 QVSNGKNSAD GNPDKAKFLS NGSGSTLEQQ VSPEKSSNAG FSWHQGLRAN EFGLDTGHCK 600 VFMDSEDVGR TLDLSVLGSY EELHGRLANM FGIERSEMLT RVLYHDASGA LKQTGDEPFS 660 DFMKTAKRLT ILTDSGSKNM GRTWITGMRN AQNGLGASNK TGPLSIFA

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MNEVEKSLDP QLWQACAGGM VNIPPVNSRV FYFPQGHAEH AQAHVDFAQA SLRVPAFVLC  60
RVSAVKFMAD PDTDEVFANI RLVPLGNNEL DFEDDGVVGI DGSENPEKPT SFAKTLTQSD  120
ANNGGGFSVP RYCAETIFPS LDYSADPPVQ TVIAKDVHGE IWKFRHIFRG TPRRHLLTTG  180
WSNFVNQKKL VAGDSIVFLR TKTGDICVGI RRAKRGNCGP ETPSGWNNGS SYGGFSVFMR  240
EDENKMARNG CGSSSPGSNM RGTRKVRPEA VVEAAARAAN GQPFEVIYYP RLSTPEFCVR  300
ASAVKAAMRI QWCSGMRFKM AFETEDSSRI SWFMGTIASA QVADPIRWPH SPWRLLQVTW  360
DEPDLLQNVK RVSPWLIESI SNMPIIHLSS FSPPRKKLRF SQHPDFTLDG QFPVSSFLGN  420
PLGPSSPLCC LPDNTPAGIQ GARHALFGIS LSDLHLNNKL QPGLFSSSFQ QLNPHSGIPN  480
GLKRGHSNSN ESLSCLLTMG NSSPNMEKSD SVKGHQFVLF GQRILTEQQI SRSCSSDSVS  540
QVSNGKNSAD GNPDKAKFLS NGSGSTLEQQ VSPEKSSNAG FSWHQGLRAN EFGLDTGHCK  600
VFMDSEDVGR TLDLSVLGSY EELHGRLANM FGIERSEMLT RVLYHDASGA LKQTGDEPFS  660
DFMKTAKRLT ILTDSGSKNM GRTWITGMRN AQNGLGASNK TGPLSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein