PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76706.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 359aa    MW: 39829 Da    PI: 10.145
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.95.5e-14135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I++ + ++Rt+ q+ s+ qky
       PON76706.1 135 PWTEEEHRIFLVGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKY 179
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MGRKCSHCGE MGHNSRTCNS RRRSHELILG GGRQLRLFGV QLELLSKSSP SSSSRWSSLD  60
INMRKSFSMD CLSSSSSPAL VAASSSIPSS SSSSSRISCS STTTTIDEIS DKLSNGYLSD  120
GLMARAQLER KKGVPWTEEE HRIFLVGLEK LGKGDWRGIS KNFVTTRTPT QVASHAQKYF  180
LRQNTLLNKK KRRPSLFDMD VQVGRDQLLS LQMDNINMSK PGETSTTQHD HPSLGFSAKT  240
MMTVPTSHLL HVKYSGTTST KFDASKIDHY EWPIFMNHHH DHDHHRHRQV PAICTFNESL  300
DSRIQPSVSS SSTKAHFLQN SITSTNATPD LELKLGAPMP LKSTKPCPQS LLFGPISVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189193KKKRR
2189194KKKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-40MYB_related family protein