PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON76364.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YC
Protein Properties Length: 262aa    MW: 29354.2 Da    PI: 6.5835
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON76364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC178.46.9e-56801831101
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   iek+tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv
  PON76364.1  80 QLQNFWANQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 178
                 89******99999************************************************************************************** PP

       NF-YC  97 prdel 101
                 pr++l
  PON76364.1 179 PREDL 183
                 **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDHQGHNQPQ SMMMVGGGAQ MPYGASPYQS NQMGGNPTSV SVASVGAIQP TSQPAGAQLA  60
QHQLAYQHIH QQQQQQLQQQ LQNFWANQYQ EIEKVTDFKN HSLPLARIKK IMKADEDVRM  120
ISAEAPVIFA RACEMFILEL TLRSWNHTEE NKRRTLQKND IAAAITRTDI FDFLVDIVPR  180
EDLKDEVVAS LPRGTVPVGG TADALPYCYM PPQHAPQVGT PGMIMGKPVM DPAMYAQQSH  240
HPYMGQQLWQ PQHEQQQSSS DR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1153159RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.33e-84NF-YC family protein