PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75758.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SRS

Protein Properties

Length: 475aa MW: 48333.5 Da PI: 7.9959

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	212.9	7.8e-66	256	417	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...aeaaskrkrelkskkqsalsstklssaeskk 98 s t++CqdCGnqakkdC+h+RCRtCCksrgf+CathvkstWvpaa+rrerq +aa + +++ +k++r +++++s+t++s++++++ PON75758.1 256 SSTTTCQDCGNQAKKDCTHRRCRTCCKSRGFECATHVKSTWVPAARRRERQLITAAGPGVGNGPGssgSTSGAKKPRL---ITSQTTSHTSTSNTTPPR 351 57889*******************************************9888776544333331225555555554...467778889999999999 PP DUF702 99 eletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++tss lP +v+++avf+cvrv++v+dge+e+aYq++v+igGhvfkG+LydqG+e+ PON75758.1 352 SFDTSSshqdasfkesLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVET 417 999999999****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MMVMMMMIGE DKGTSSVVAT TRRLPSDSGA FADWVASSSS AAAAAAAAAA AAAAGRPTPP 60 DDLSLGFNAG PTAGATSTSS SAMWSGPPSR PINYGLPPEM GMVGLRDVFV VAPASSFHHN 120 NHHHHHHNLN HDPSLISDHS LNGSNPATAL GVGVGVGVIP LLTATPCLAP PHHQQLDEVS 180 AEANAFGAAS ARSRGGGIQL WQSQNQAAAG SAAQPQLHQH LFKKPSILDH GNSGAGGNLV 240 IQSGGGGIVG SGSTSSSTTT CQDCGNQAKK DCTHRRCRTC CKSRGFECAT HVKSTWVPAA 300 RRRERQLITA AGPGVGNGPG SSGSTSGAKK PRLITSQTTS HTSTSNTTPP RSFDTSSSHQ 360 DASFKESLPG QVRAPAVFKC VRVTAVEDGE DEYAYQAVVK IGGHVFKGFL YDQGVETRDA 420 FPNLSELHLG GGGCGGGGGG RNGVSSSSPI LDPSDVYAAS TGGLLGGSSY GNPIN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MMVMMMMIGE DKGTSSVVAT TRRLPSDSGA FADWVASSSS AAAAAAAAAA AAAAGRPTPP  60
DDLSLGFNAG PTAGATSTSS SAMWSGPPSR PINYGLPPEM GMVGLRDVFV VAPASSFHHN  120
NHHHHHHNLN HDPSLISDHS LNGSNPATAL GVGVGVGVIP LLTATPCLAP PHHQQLDEVS  180
AEANAFGAAS ARSRGGGIQL WQSQNQAAAG SAAQPQLHQH LFKKPSILDH GNSGAGGNLV  240
IQSGGGGIVG SGSTSSSTTT CQDCGNQAKK DCTHRRCRTC CKSRGFECAT HVKSTWVPAA  300
RRRERQLITA AGPGVGNGPG SSGSTSGAKK PRLITSQTTS HTSTSNTTPP RSFDTSSSHQ  360
DASFKESLPG QVRAPAVFKC VRVTAVEDGE DEYAYQAVVK IGGHVFKGFL YDQGVETRDA  420
FPNLSELHLG GGGCGGGGGG RNGVSSSSPI LDPSDVYAAS TGGLLGGSSY GNPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	5e-73	SRS family protein