PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75566.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 624aa    MW: 71380.1 Da    PI: 5.9948
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75566.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.83.6e-1132516223374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL++cA+av+  d+++a++ L ++++++sp+gd++qRla+yf+++L+arl+++ + ly+al +se s    ++ l+a++++  ++P++++s+  aNq+
  PON75566.1 251 TLLTQCAQAVAGFDQRAANQQLRQVRQHSSPHGDAFQRLAHYFANGLEARLSGTRTALYSALVSSEMS---LADILKAYQVYITACPFFRMSFCFANQT 346
                 69**************************************************************9999...**************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 I + +e+ + +HiiDf+i +G+QWp L+q L++ p+gpp+lRiTg++ p++g   +e++eet++rLa++++++ vp e+nv +a++++++++e+L++++
  PON75566.1 347 IWKLAENVKSIHIIDFGILYGFQWPELIQRLSQTPGGPPKLRITGIELPQPGlrPSEKVEETKRRLANYCKRFSVPSEYNV-IAQKWQTIRYEDLNIDR 444
                 ********************************************************************************9.7**************99 PP

        GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                   +E ++Vn+ ++l +++de+v ++++rd+vLkl+++++P+++++   +  +n++ F +rf  al +y alfd++++++pr++e r k Er++ gr+i+
  PON75566.1 445 drDELVVVNCLYRLRHIPDETVVMNNPRDTVLKLIRRINPDLFIHGVVNGTYNAPFFETRFKAALFHYYALFDMFDTTVPRQDEFRLKFERAIYGRDIE 543
                 99************************************************************************************************* PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv aceg+er+er et+++W+ r ++aGFk++pl++++++ +k  +   +++ + ve + ++l++gWk+r ++++S+W+
  PON75566.1 544 NVMACEGSERVERPETYRQWQVRNMRAGFKQIPLDQEIYEAVKNTVYSSYDKNFVVERHGQWLLQGWKGRLIYALSCWK 622
                 **************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 624 aa     Download sequence    
MNTLFEELTV SSIDDFNFNH GSESDLPHLS DSGQSSSLGS DGESSVSADS FNATLKYITE  60
MLMEEEDLER KASTLEDPLA LQAAEKSFYD VLGQNYPPSS DKGENLCSGY RFQTNVVQDS  120
GFDHIQSITH FSGKAGETSS FSQTGKPQII DLESFEYNLL NEPKGKRNLL RAYGDDRDES  180
RKSKQSAVCT DDSEPIEMFD RVLLYQGGTT KSDESNACQK SSKNEQPKGS GKTVRSMKKE  240
DNKTEVVDLW TLLTQCAQAV AGFDQRAANQ QLRQVRQHSS PHGDAFQRLA HYFANGLEAR  300
LSGTRTALYS ALVSSEMSLA DILKAYQVYI TACPFFRMSF CFANQTIWKL AENVKSIHII  360
DFGILYGFQW PELIQRLSQT PGGPPKLRIT GIELPQPGLR PSEKVEETKR RLANYCKRFS  420
VPSEYNVIAQ KWQTIRYEDL NIDRDRDELV VVNCLYRLRH IPDETVVMNN PRDTVLKLIR  480
RINPDLFIHG VVNGTYNAPF FETRFKAALF HYYALFDMFD TTVPRQDEFR LKFERAIYGR  540
DIENVMACEG SERVERPETY RQWQVRNMRA GFKQIPLDQE IYEAVKNTVY SSYDKNFVVE  600
RHGQWLLQGW KGRLIYALSC WKPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-180GRAS family protein