PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75560.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 735aa    MW: 82130.5 Da    PI: 4.8503
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS387.31.7e-1183627321373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+avs++d++ a++lL+++++++sp gd  qRla+yf+++L+arla+++se+y+ l++++ts    ++ l+a++++  ++P+ k++ + aN
  PON75560.1 362 LRTLLISCAQAVSANDFSTANELLKQMRQHSSPFGDGSQRLAHYFANGLEARLAGTGSEIYAPLASKRTS---AADMLKAYQAYISACPFKKIAIVFAN 457
                 6789*********************************************************999999998...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++Il+a+e+++++HiiDf+i +G+QWpa++q L+ Rp+gpp+lRi g++ p++g   +e++eetg+rL+k+++++gvpfe+n+ va+++e++++e+L++
  PON75560.1 458 RMILKAAEKATKLHIIDFGILYGFQWPAFIQCLSRRPGGPPKLRISGIELPQQGfrPAERVEETGHRLEKYCKRFGVPFEYNA-VAQKWENIQIEDLKI 555
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E++aVn+ l+ ++llde+v ++s+r++vL+l+++++P+++v++  + ++n++ F++rf eal  ++++fd  +a++ re+  r + E+e+lgre+ 
  PON75560.1 556 DRNEVIAVNCLLRFKNLLDETVVVDSPRNAVLNLIRKIKPDIFVHATVNGSYNTPFFVTRFREALFNFASFFDVADATFTREDPMRLMFEKEFLGREVI 654
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+aceg+er+er et+++Wr   ++aGF+++pl+ + +k+ k+++++ +   + v+e+ +++++gWk+r L++ S+W
  PON75560.1 655 NVIACEGSERVERPETYKQWRVLSTRAGFRELPLDMELMKKLKTMVETGYHSDFVVDEDGNWMLQGWKGRVLYASSCW 732
                 ************************************************99777************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MDRNVPQETN LGFNTSLDQY PNSVNGMEAS DASLDLSFDG VSPSDDGDFS DTVLKYINQM  60
LMEEDMEAKP CMFHDPLALQ AAEKSLYDVL CEKYPPSPNQ HPLCIDPNVE SPDDSFVASV  120
SDSPGNVSSS SSSSTGASIQ SFWTNVDPVD YKPSILQNPV PANFVFGSTS NSSLQSSSSF  180
PFNFSTNGND LMMGLSLSEL QIPNMLSGNE LMLQFNRGLE EGNKFLPKGN QLDIHLENNK  240
LSLGANGKVS NGLVEVEKDE REHLPVGLIG RKNHDREETN LVDRRSNKQL AVYTEETEIS  300
ELFDKVLLCG EGKEEPLICT ADEANQNDEA DKSTEHGGRF SGTSSGKTRA KLHDDNREVV  360
DLRTLLISCA QAVSANDFST ANELLKQMRQ HSSPFGDGSQ RLAHYFANGL EARLAGTGSE  420
IYAPLASKRT SAADMLKAYQ AYISACPFKK IAIVFANRMI LKAAEKATKL HIIDFGILYG  480
FQWPAFIQCL SRRPGGPPKL RISGIELPQQ GFRPAERVEE TGHRLEKYCK RFGVPFEYNA  540
VAQKWENIQI EDLKIDRNEV IAVNCLLRFK NLLDETVVVD SPRNAVLNLI RKIKPDIFVH  600
ATVNGSYNTP FFVTRFREAL FNFASFFDVA DATFTREDPM RLMFEKEFLG REVINVIACE  660
GSERVERPET YKQWRVLSTR AGFRELPLDM ELMKKLKTMV ETGYHSDFVV DEDGNWMLQG  720
WKGRVLYASS CWAPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein