PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON75470.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HD-ZIP

Protein Properties

Length: 264aa MW: 29403.5 Da PI: 4.8713

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON75470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.1	1.5e-18	55	109	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++f++ q++ Le++F+++ + +++ +LA++lgL+ rqV +WFqN+Ra++k PON75470.1 55 NNKRRFSDGQIKSLESMFASETRLEPRKKLQLATELGLQPRQVAIWFQNKRARWK 109 56789*************************************************9 PP
2	HD-ZIP_I/II	115.9	2.4e-37	56	147	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+ q+k+LE++F +e++Lep++K +la+eLglqprqva+WFqn+RAR+k+kqlE+d++ L ++y++l+++ e+L+ke++ L +l++ PON75470.1 56 NKRRFSDGQIKSLESMFASETRLEPRKKLQLATELGLQPRQVAIWFQNKRARWKSKQLERDCSILLANYNTLASRFEALKKEKQGLVLQLQK 147 79************************************************************************************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MFEDQTIIHG EYSYCPTSEA FDSNSHHEAT FSSSNNSSSS SGVVLGTTRK KKSKNNKRRF 60 SDGQIKSLES MFASETRLEP RKKLQLATEL GLQPRQVAIW FQNKRARWKS KQLERDCSIL 120 LANYNTLASR FEALKKEKQG LVLQLQKLNA DLVQSSKGTD NDKDSGSGKP TESISEANKP 180 SLSSLEKSER VLGVLSDDDI SMKAEYDFGG GVLEPAEEAE LLSMNMAEPA ADSSLTSPED 240 WGSLNSETLF DESTGGYQWW DFWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	1e-54	HD-ZIP family protein