PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON75009.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 729aa    MW: 81336.5 Da    PI: 6.8601
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON75009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox634.5e-202883156
                TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++ +++t++q+++Le++F+ +++p++++r++L ++lgL+ +qVk+WFqN+R++ k
  PON75009.1 28 KKSYHRHTTHQIQQLEAFFKDCPHPDENQRRQLGRELGLEPKQVKFWFQNKRTQTK 83
                688899**********************************************9987 PP
2START118.78e-382214483204
                 HHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..................SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
       START   3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.................dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                 a +a +el+k+  ++ep+W k+s+     ++++++ ++                    + e ++ s+vv   +a lv  +ld++ +W   ++     a+
  PON75009.1 221 AASAVDELIKLLRLDEPLWIKLSSATAASTCRYTLHRDSYekmfpmrdnhfrntsstARFESSKHSRVVAVSAAFLVGMFLDSN-KWEDLFPtiiaNAK 318
                 67899******************************99877999************99999************************.99999999999*** PP

                 EEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
       START  81 tlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                 t+ev++ g      galqlm  ++  lsplvp R+f+f+R+++q + g wvivdvS d  ++     s  R+ +lpSg+++++++ng skv wvehv +
  PON75009.1 319 TIEVLEHGelgnrhGALQLMHEQMHILSPLVPsREFYFLRHCQQIEVGNWVIVDVSYDFSKETI---SPSRCWKLPSGCIVQDMPNGCSKVSWVEHVQV 414
                 **********************************************************999854...678***************************** PP

                 -SSXX.HHHHHHHH.HHHHHHHHHHHHHHTXXXX CS
       START 173 kgrlp.hwllrslv.ksglaegaktwvatlqrqc 204
                 +++   h l+r lv +s++a ga +w   l+r  
  PON75009.1 415 DDKNQtHRLYRDLVcNSTTAYGAERWIVSLERMS 448
                 988766*****98648899999999988777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    
MEFEMGSVVG SGDEHDHEAP NSRKGRNKKS YHRHTTHQIQ QLEAFFKDCP HPDENQRRQL  60
GRELGLEPKQ VKFWFQNKRT QTKAQNERAD NSNLRAQNER IQCENLAIRE ALKNVICPSC  120
GGPSFGQEER QRSLHTLQLQ NAQLKEEHEK VSSLLAKYMG KPISEIEKLT SIVPNGSSLE  180
ILPLGISSSS LNVENNQSVL FPNYQVKGIL DMERELMAET AASAVDELIK LLRLDEPLWI  240
KLSSATAAST CRYTLHRDSY EKMFPMRDNH FRNTSSTARF ESSKHSRVVA VSAAFLVGMF  300
LDSNKWEDLF PTIIANAKTI EVLEHGELGN RHGALQLMHE QMHILSPLVP SREFYFLRHC  360
QQIEVGNWVI VDVSYDFSKE TISPSRCWKL PSGCIVQDMP NGCSKVSWVE HVQVDDKNQT  420
HRLYRDLVCN STTAYGAERW IVSLERMSER FNCYTELTES IAPIYDFGGV ISLAEGKRSI  480
MKLGHRMVKS FCGMLSMSGK LDFPQLSEVN NSGVRVAVRK STTVGQPLGV IVSAATSLWL  540
PLPPQIVFDF FTDHRSRLQW DVLCNGYPVH EIAHISTGAH PGNCISILRP FIPTENNILM  600
LQERFVDALG SMIIYAPIDV PALNVAISGE DSSNIPILPS GLIISGDGRT GTDHSSGATN  660
VESFASSFSN KSYNSASSGS LLTVAFQILV SCPPTCNQMI NMESVATVNT LISTTVQKIK  720
ASLNCSALD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein