PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON74744.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HB-PHD

Protein Properties

Length: 994aa MW: 109807 Da PI: 5.1795

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON74744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	41.8	1.9e-13	828	872	12	56
HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ L + F++n+yp++++++ LA++lgLt +qV+ WF N R + PON74744.1 828 VQSLYKSFKENQYPDRAKKQSLAEELGLTSQQVSKWFENMRWSSR 872 57899***********************************98776 PP
2	PHD	37.8	4.3e-13	445	500	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ ++++++lCdg C++ fH+ Cl+++l s ++p + wlC+ C++k PON74744.1 445 FCAKCGSkdLSADNDIILCDGaCDRGFHQFCLEPPLLSGDIPPDdeGWLCPGCDCK 500 699*977677****66**************999999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 994 aa Download sequence
MSEQVTEIEP SEQIHHIESK TIENVQRELG QDLCTEPSEN QQAIAAAGSS GINKHLEAYD 60 GNVANNSLTK ELDLPKEDGS TSYKTEKNSC PQQVKSELKH EHGAGNQCTE PSGQKHHVDS 120 NLLQNEAGKT NCKVFTFVVT EQCETITENR SLICDGKLAA PSEGVIRNCQ TDKSECPQQG 180 TLGQTKDHDC GSVLGETPKT EDHPGSGLVK NVPIETSNAA SDVIATERLE PALGDISKSP 240 FSKQPEQPED VKEKSSLELV ETSSKSLRQN SSQLGCRDKR TSKSRKKKYM LRSSIGNDRV 300 LRSRTQEKPK SLESSNNLGG ASNGVEKKRK ERKKKREKRV IADEFSRMRK RLRYFLNRIQ 360 YEQNLIDAYS SEGWKGNSLE KIKPEKELQR ATSEIVRRKL KIRDLFQQLD ALCADGRFPK 420 SVFDSEGQID SEDNAWYFAY VGQIFCAKCG SKDLSADNDI ILCDGACDRG FHQFCLEPPL 480 LSGDIPPDDE GWLCPGCDCK VDCVHLLNDS HGTKLSVSDS WEKVFPEAAA AAREGQNQDH 540 NPEFPSDDSD DDDYDPDGPA TDEKVEGNES SSDESDYASA CDELEAPRND EQSLGLSSDD 600 SEDNDYDPSA LDIDENVKEE SSSSDFTSDS EDLAATPDDN KFSENDKVHM LSPLDAKRPL 660 QKSDKQSFRR GENKSSLKGE LLDILNSSPG QDSSPPAYGK RHVERLDYKR LHDETYGNVP 720 SDSSDDEDWN GTAATRKRKK TTGQVAPEFP NGNASTDKNE TTTEAINHNL ENNEPISRRR 780 TRQMSLAKDA KNSPSKCLEG SPKSGSTGSR VKSSYRRLGE AVTQNLFVQS LYKSFKENQY 840 PDRAKKQSLA EELGLTSQQV SKWFENMRWS SRHSSCKEAG MSESVSNGSA SSPQTNKKQL 900 ESEKPMNIKN STCNGAQNEQ VTGIADALPE SCSKNVGDDK TKVLANESNG QNSAAQSSGR 960 KRGRPRLQRP ETPALVNACE TGGSKKRGRR KSAP

Sequence ? help Back to Top

Protein Sequence Length: 994 aa Download sequence

MSEQVTEIEP SEQIHHIESK TIENVQRELG QDLCTEPSEN QQAIAAAGSS GINKHLEAYD  60
GNVANNSLTK ELDLPKEDGS TSYKTEKNSC PQQVKSELKH EHGAGNQCTE PSGQKHHVDS  120
NLLQNEAGKT NCKVFTFVVT EQCETITENR SLICDGKLAA PSEGVIRNCQ TDKSECPQQG  180
TLGQTKDHDC GSVLGETPKT EDHPGSGLVK NVPIETSNAA SDVIATERLE PALGDISKSP  240
FSKQPEQPED VKEKSSLELV ETSSKSLRQN SSQLGCRDKR TSKSRKKKYM LRSSIGNDRV  300
LRSRTQEKPK SLESSNNLGG ASNGVEKKRK ERKKKREKRV IADEFSRMRK RLRYFLNRIQ  360
YEQNLIDAYS SEGWKGNSLE KIKPEKELQR ATSEIVRRKL KIRDLFQQLD ALCADGRFPK  420
SVFDSEGQID SEDNAWYFAY VGQIFCAKCG SKDLSADNDI ILCDGACDRG FHQFCLEPPL  480
LSGDIPPDDE GWLCPGCDCK VDCVHLLNDS HGTKLSVSDS WEKVFPEAAA AAREGQNQDH  540
NPEFPSDDSD DDDYDPDGPA TDEKVEGNES SSDESDYASA CDELEAPRND EQSLGLSSDD  600
SEDNDYDPSA LDIDENVKEE SSSSDFTSDS EDLAATPDDN KFSENDKVHM LSPLDAKRPL  660
QKSDKQSFRR GENKSSLKGE LLDILNSSPG QDSSPPAYGK RHVERLDYKR LHDETYGNVP  720
SDSSDDEDWN GTAATRKRKK TTGQVAPEFP NGNASTDKNE TTTEAINHNL ENNEPISRRR  780
TRQMSLAKDA KNSPSKCLEG SPKSGSTGSR VKSSYRRLGE AVTQNLFVQS LYKSFKENQY  840
PDRAKKQSLA EELGLTSQQV SKWFENMRWS SRHSSCKEAG MSESVSNGSA SSPQTNKKQL  900
ESEKPMNIKN STCNGAQNEQ VTGIADALPE SCSKNVGDDK TKVLANESNG QNSAAQSSGR  960
KRGRPRLQRP ETPALVNACE TGGSKKRGRR KSAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	328	335	KRKERKKK
2	329	337	RKERKKKRE
3	332	338	RKKKREK
4	332	339	RKKKREKR
5	736	740	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	5e-97	HB-PHD family protein