PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON74428.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NF-YC

Protein Properties

Length: 270aa MW: 30343.3 Da PI: 5.8696

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON74428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	177.2	1.6e-55	81	185	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie++ dfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdflvdi+ PON74428.1 81 QLQMFWANQmqeIEQTPDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 179 89****9878899******************************************************************************** PP NF-YC 97 prdelk 102 prdelk PON74428.1 180 PRDELK 185 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MDQSEQTQQQ QPVMGIVAGS GQMSYGPPSY QTSPMVASGA PAVTVPSPTQ PPGTFSNSSH 60 QLAYQQAQHF HHQQQQQQQQ QLQMFWANQM QEIEQTPDFK NHSLPLARIK KIMKADEDVR 120 MISAEAPVIF AKACEMFILE LTLRSWIHTE ENKRRTLQKN DIAAAISRTD VFDFLVDIIP 180 RDELKEEGLG VTKGTLPVVG SPADIPYYYV PPQHPAGPTG MIMGKPVDQA VMYAAQQPRP 240 PMAFVPWPQT QPQQQQQQQQ QQQQQPQTDT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	160	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	4e-83	NF-YC family protein