PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON74318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 253aa MW: 28910 Da PI: 9.0616 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.4 | 3.9e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss PON74318.1 9 KRIENANSRQVTFSKRRAGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 73.8 | 4.8e-25 | 82 | 171 | 11 | 100 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 e+++++ ++e++ Lk+e+ Lq++q +l+G+dL+ LslkeL +LeqqL+++l +++++K++ll+eq+e+++ +e+++ en++Lr+++ee PON74318.1 82 EKTEKQDSKEVDVLKDEVARLQKKQLRLMGKDLNGLSLKELYHLEQQLNEGLMSVKERKERLLKEQLEQSRLQEQRATLENETLRRQIEE 171 55677899*******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRGKIEIKR IENANSRQVT FSKRRAGLLK KAQELAILCD AEVAVIIFSN TGKLFEFSSS 60 GMKRTLSRYN KCVDYPDGAI VEKTEKQDSK EVDVLKDEVA RLQKKQLRLM GKDLNGLSLK 120 ELYHLEQQLN EGLMSVKERK ERLLKEQLEQ SRLQEQRATL ENETLRRQIE ELRCLFPRTE 180 CIVPSYLEYY PIEKKNSSAN QSVIGPDQAS NYAAEKGDSD TTLHLGLPTD VYRKRKAPEK 240 EMHSNDSGSN IGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 4e-75 | MIKC_MADS family protein |