PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON74124.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 173aa MW: 19302.7 Da PI: 4.3764 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 57.9 | 1.3e-18 | 10 | 50 | 2 | 42 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 +ienk r v+fskR ng++KKA+ELS L++a++a++++s+ PON74124.1 10 KIENKEHRLVSFSKRWNGLFKKAHELSSLTGAQIAILVLSE 50 79*************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MVKRRIDIQK IENKEHRLVS FSKRWNGLFK KAHELSSLTG AQIAILVLSE FSRPYFHASP 60 PSFITQLLNP EFSVGASTSS SSSPELAVES SSWLRYLLDF EVEGCEEVDE LVAAKEKLEE 120 MREKAAMALD LNFANSLLST SGDLDDDDSL PSNVDDSMLH DWIGLFEGCI SSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51860.2 | 2e-14 | MIKC_MADS family protein |