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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PON73904.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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| Family | GeBP | ||||||||
| Protein Properties | Length: 313aa MW: 35282.1 Da PI: 6.823 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 86.2 | 4.3e-27 | 97 | 196 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsd..didafy.efvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96
+ +r+w+ eDe lLq ++d++a++ p++ ++ fy + vk ++ ++++k+qlveK+rrLK+K++++++k + sg +++f+++h+++ife+s+kiW
PON73904.1 97 KKKRVWTAEDENELLQSFLDYTASRRIGPHQktATNSFYsDRVKPELRLRFNKTQLVEKLRRLKRKYQNNSTKmKGSGVDFRFRSPHERSIFEISQKIW 195
568************************8888557899*94579******************************556899******************** PP
DUF573 97 g 97
PON73904.1 196 S 196
6 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 313 aa Download sequence |
MAWPLVRWIM SSSSSSSSSS SSFSASEFDV EFNETEDQES PTNDVVSRDQ PEYDDDGVDS 60 VTVAVTGTAD PSSSTSKRRR TDENYYDAAM TVRLAEKKKR VWTAEDENEL LQSFLDYTAS 120 RRIGPHQKTA TNSFYSDRVK PELRLRFNKT QLVEKLRRLK RKYQNNSTKM KGSGVDFRFR 180 SPHERSIFEI SQKIWSGGGG SSVVVDHEDV MDDNTGGAEK LRPRTRSQTR NSSGGSMRSA 240 KRGVLDCDES DTTGLVMGLA LKPMSFEFKL GEGDEKWREQ QIMELEVYSK RLELVQSRVK 300 AALDMLRSSP TGG |
| Nucleic Localization Signal ? help Back to Top | |||
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| No. | Start | End | Sequence |
| 1 | 77 | 100 | KRRRTDENYYDAAMTVRLAEKKKR |
| 2 | 78 | 101 | KRRRTDENYYDAAMTVRLAEKKKR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G28040.1 | 7e-25 | GeBP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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