PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON73901.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GeBP

Protein Properties

Length: 416aa MW: 44893.5 Da PI: 4.583

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON73901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	116.8	1.3e-36	119	218	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 klfqrlw++eDei lLqG++d+++++gk + ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ k++sgk++sf+++hdq +fe+s+kiW PON73901.1 119 KLFQRLWTDEDEIGLLQGFLDYTTQRGKtthHGQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKDFSFKSPHDQATFEISRKIW 217 579***********************5433345************************************************************** PP DUF573 97 g 97 PON73901.1 218 S 218 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MASHQDDVVL PGEEEELDSS SQDDDEDDED DDEEENDDVL ADASPSTSSA GADRFRVAVA 60 FAPPSANTVT VALPAVVRNG EPRPSLATAA AAATTTVIAG NDVVSASQEK KPAFDDSRKL 120 FQRLWTDEDE IGLLQGFLDY TTQRGKTTHH GQNDTALFYD QIKSKLQLDF NKNQLVEKLR 180 RLKKKYRNVI GKISSGKDFS FKSPHDQATF EISRKIWSDV GRIGPDDNAL EDDDPNPSNP 240 NFNVEVKAED GAGFVFEKKT PTPRSRKRSR SKPAVGADER RCINDASPSN KENYNNGGVG 300 GANSIVSNSG GNVQGLIEET VKSCLSPLFK ELVSSAMAGG GPCAAARGFG GLALSPMPLS 360 FGGPPPSMGF GGGELVDERW RKQQILELEV YSKRLELVQD QIKAALEDLR SRGGGS

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MASHQDDVVL PGEEEELDSS SQDDDEDDED DDEEENDDVL ADASPSTSSA GADRFRVAVA  60
FAPPSANTVT VALPAVVRNG EPRPSLATAA AAATTTVIAG NDVVSASQEK KPAFDDSRKL  120
FQRLWTDEDE IGLLQGFLDY TTQRGKTTHH GQNDTALFYD QIKSKLQLDF NKNQLVEKLR  180
RLKKKYRNVI GKISSGKDFS FKSPHDQATF EISRKIWSDV GRIGPDDNAL EDDDPNPSNP  240
NFNVEVKAED GAGFVFEKKT PTPRSRKRSR SKPAVGADER RCINDASPSN KENYNNGGVG  300
GANSIVSNSG GNVQGLIEET VKSCLSPLFK ELVSSAMAGG GPCAAARGFG GLALSPMPLS  360
FGGPPPSMGF GGGELVDERW RKQQILELEV YSKRLELVQD QIKAALEDLR SRGGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-75	GeBP family protein