PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON73163.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
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Family | CO-like | ||||||||
Protein Properties | Length: 334aa MW: 36583.9 Da PI: 6.5879 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 26.4 | 1.4e-08 | 4 | 36 | 4 | 36 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ +++ ++lfC+ + +lC +C ++ H PON73163.1 4 KLCDSCKSATATLFCRADAAFLCVTCDSNVHAA 36 68***************************9954 PP | |||||||
2 | zf-B_box | 26.3 | 1.6e-08 | 46 | 91 | 3 | 42 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ +++ C+ + lC +C +H+ H++vp+ PON73163.1 46 VWVCEVCEQAPAHVTCKADAAALCITCDRDIHSAnplarrHERVPV 91 689*****************************66899999*99986 PP | |||||||
3 | CCT | 69.9 | 6.4e-24 | 273 | 316 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ PON73163.1 273 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 316 9*****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MASKLCDSCK SATATLFCRA DAAFLCVTCD SNVHAANKLA SRHARVWVCE VCEQAPAHVT 60 CKADAAALCI TCDRDIHSAN PLARRHERVP VTPIYESVNK SAGTVNFLND RYISDVEGDA 120 AEVSTEEAEA ASWLLPNPKA IDSPDLNSGQ YVFPDMVPYL DLDYGPLDPK LEAQEQNSSG 180 TDGVVPVHYK GTSQPPMVNE QCYEMDFSGN KHFVHGYNAH CLSQSVSSSS LDVGVVPDGN 240 AMTDISNGYG SKPMSSSGPE SARQAAQIST ADREARVLRY REKRKNRKFE KTIRYASRKA 300 YAETRPRIKG RFAKRTEVEL EADRISGYGV VPTF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24930.1 | 1e-144 | CO-like family protein |