PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON72715.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family ARF
Protein Properties Length: 903aa    MW: 100064 Da    PI: 6.4376
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON72715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.27.6e-24127228199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  PON72715.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQL 221
                 99*****************************8544444..48************************************************..8899999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  PON72715.1 222 LLGIRRA 228
                 ****997 PP
2Auxin_resp119.13.4e-39253336183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdld vrWpnS+Wrs+k
  PON72715.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDAVRWPNSHWRSVK 336
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 903 aa     Download sequence    
MRLSSVGFSP QPQEGEKRVL NSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSLQEQKEA YLPAELGAPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDAVRWPNS HWRSVKVGWD ESTAGDRQPR VSLWEIEPLT  360
TFPMYPSPFP LRLKRPWPPG LPTFHGIKDE DLGMNSQLMW LRGDYGDRGI QGLNFQGVGV  420
TPWVQPRLDA SMFGLQPDMY QAMAAAAALQ EMRTVDPSKP IPTSLLQFQQ TQNLPSRSAT  480
ASLMQPQMLQ QPQPQQAFLQ SMQDNQQSTQ RQTQTSLHLQ QQLQHQHSFN SNSSQQQQQM  540
PPQQQLVDHQ QIPSAVSPMS HFSSASQSQS PSLQAISSMC QQQNFPDSNG TAVTSSMVSP  600
LHSILGSFSP DESSHLLNMP RSNLSSAVWP SKRAAVEPLI SSGPSQCVLP QVEQLGPPLT  660
NISQNSVSLP PFPGRECTID QEGNTDPQSH LLFGVNIEPS SLLMQNGMSN LRGVGSDSDS  720
TTIPFPSSSY MSTTGTDFSL NPAITPSSCI DESGFLQSPE NGGQGNQPSR TFVKVYKSGS  780
FGRSLDLTKF SSYNELRIEL ARMFGLEGEL EDPLRSGWQL VFVDRENDVL LLGDDPWQEF  840
VNSVWCIKIL SPQEVQQMGK RGLELLNSVS IQRLANNSCD DYPSRQDSRN LSSGITSVGS  900
LDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein