PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PON72706.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 408aa MW: 46655.6 Da PI: 7.9598 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0016 | 27 | 49 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++Cg + s ks+ ++Hi tH PON72706.1 27 YFCEYCGICRSKKSLITSHILTH 49 78********************6 PP | |||||||
2 | zf-C2H2 | 20.8 | 1.1e-06 | 74 | 95 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H PON72706.1 74 TCEECGVTFKKPAYLKQHMQSH 95 6*******************99 PP | |||||||
3 | zf-C2H2 | 17.5 | 1.2e-05 | 129 | 153 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ dC+ s++rk++L+rH+ H PON72706.1 129 YVCSvdDCHSSYRRKDHLTRHLLGH 153 99*******************9877 PP | |||||||
4 | zf-C2H2 | 11 | 0.0013 | 158 | 183 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C+ Fs + n+krH + H PON72706.1 158 FKCPieNCKCEFSIQGNMKRHVKEqH 183 89********************9988 PP | |||||||
5 | zf-C2H2 | 17.5 | 1.2e-05 | 198 | 222 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F+ s L++H +H PON72706.1 198 YVCQeaGCGKAFRFASKLRKHEDSH 222 99*******************9888 PP | |||||||
6 | zf-C2H2 | 19.6 | 2.4e-06 | 289 | 313 | 2 | 23 |
EET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirt.H 23 kC C+++Fs+ksnL++H + H PON72706.1 289 KCMykGCDRTFSTKSNLNQHVKAaH 313 577779**************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 408 aa Download sequence |
MEEEAGGGGG GGEEERPIFL FRDVRRYFCE YCGICRSKKS LITSHILTHH EEELDKARAE 60 EEDDATEGVK GSNTCEECGV TFKKPAYLKQ HMQSHSPEYQ VGRPPEKLHQ EGLNHATFLV 120 FVILSQRPYV CSVDDCHSSY RRKDHLTRHL LGHRGKLFKC PIENCKCEFS IQGNMKRHVK 180 EQHNGDNPST STESEKQYVC QEAGCGKAFR FASKLRKHED SHVKLDSVEA VCAEPGCMKI 240 FTNEQCLKEH IHSCHQHITC EVCGTKQLKK NLKRHLRTHE GKGPVESIKC MYKGCDRTFS 300 TKSNLNQHVK AAHLKQKPFV CSFSGCGARF SYKHVRDNHE NTGCHVYTHG DFEEADEQFR 360 SRPRGGRKRK YPTVEMLVRK RVSPPNQLDG SFGCFSNFLC QDEEQDEP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 362 | 370 | RPRGGRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-138 | C2H2 family protein |