PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON70774.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family BBR-BPC
Protein Properties Length: 337aa    MW: 37522.4 Da    PI: 9.8702
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON70774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind389.74.2e-11913371301
   GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla 92 
                 mdd g+ e  r+kg +y+ +  + + +++   +q+m ++aerda+i+ernlalsekkaa+aerdmaflqrd+a+aern+a++erdn++++l+++ensl+
  PON70774.1   1 MDDGGHCEngRHKGdQYKTTqgQWMMQHQpsMKQIMGIMAERDAAIQERNLALSEKKAALAERDMAFLQRDAAIAERNNAILERDNAIATLQYRENSLS 99 
                 99*9999889*******9444444444432146****************************************************************99 PP

   GAGA_bind  93 ....salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185
                     sa+p+g+q+++g+k++++ q  +++ +++++ ++  re++++++lp+  +a+++ +++      r+k++ke+k  +++k+ +k+ +k k+es+d 
  PON70774.1 100 ngnmSACPPGCQISRGVKHMHHPQPhVHHlQHMNEASYSSREMNTSDSLPMPAEAPDTAKSR------RGKRAKEPKPISPNKRASKPPRKIKRESEDL 192
                 99999******************9955668899999************99888777666554......4556777777777777777777777777774 PP

   GAGA_bind 186 r.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRi 255
                 +                             sk+++k +dl+ln+v++Dest+P+PvCsCtG+lrqCYkWGnGGWqS+CCttt+S+yPLP ++++r+aR+
  PON70774.1 193 NkiafgksqewksgqsmvgggddlnkqsvvSKSDWKGQDLGLNQVTYDESTMPAPVCSCTGVLRQCYKWGNGGWQSSCCTTTMSMYPLPSVPNKRHARV 291
                 4477888889999************************************************************************************** PP

   GAGA_bind 256 agrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 +grKmS++af+klL++Laa+G+dlsnpvDLkd WAkHGtn+++tir
  PON70774.1 292 GGRKMSGSAFNKLLNRLAADGHDLSNPVDLKDNWAKHGTNRYITIR 337
                 *********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MDDGGHCENG RHKGDQYKTT QGQWMMQHQP SMKQIMGIMA ERDAAIQERN LALSEKKAAL  60
AERDMAFLQR DAAIAERNNA ILERDNAIAT LQYRENSLSN GNMSACPPGC QISRGVKHMH  120
HPQPHVHHLQ HMNEASYSSR EMNTSDSLPM PAEAPDTAKS RRGKRAKEPK PISPNKRASK  180
PPRKIKRESE DLNKIAFGKS QEWKSGQSMV GGGDDLNKQS VVSKSDWKGQ DLGLNQVTYD  240
ESTMPAPVCS CTGVLRQCYK WGNGGWQSSC CTTTMSMYPL PSVPNKRHAR VGGRKMSGSA  300
FNKLLNRLAA DGHDLSNPVD LKDNWAKHGT NRYITIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-147BBR-BPC family protein