PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70744.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

E2F/DP

Protein Properties

Length: 872aa MW: 96479.3 Da PI: 5.6314

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.2	9.1e-26	603	667	1	70
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL+llt+kf++l++++e+++++ln+ a+ L +v ++RRiYDi+NVLe+++liek++kn+irwk PON70744.1 603 RYDSSLGLLTRKFVNLIHEAEDRTLDLNHTADIL---EV--QKRRIYDITNVLEGIGLIEKTSKNHIRWK 667 6899****************************...99..**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 872 aa Download sequence
MCETNNQSGS VQNSRVTWEG CSVLLDINDG DRLVFARLSA AATLKIGNKN CSLQPLIGCA 60 FGSVFRVETG SEGPYLSRFS PSLEGNNIQE NNDSQFKDES KDNRALVDDN KAQSLTGEDI 120 DAMRRDGATG DEIVEALIAN SATFEKKTLF SQEKYRIKKQ KKYAPKVLVR RPFARSICEA 180 YFKKYPVRIG FLRVDTLSLL LSMANVSANS DVLVVDMVGG LLAGAVAERM GGTGYICSTY 240 VGKTPYSMEI VRIFNFGNDI CKSIVRSSLD HLSSSHNGSL EQTDPSNTKG GLDDQTSSSV 300 TTDEICVASE NEISNLVEDN ISHGTRGSKS VKAGEKAPEE VIKLWKENGF SSLIVAAPDQ 360 DTWSLVKELL PLLSNSAPFA IYHQFLQPLA TCMHNLQLGK MAIGLQISEP WLREYQVLPS 420 RTHPCMQMSA FGPGGGGSEG PGGSGRARVG PYEKGILSLV EAEGGRRGFE QNPSSVHGLS 480 QFQFQPLLHS HSHSHYSLTP TNGELFPSTS SPTPHLHHHH HHHSPLAPPD AFNRSRFSDF 540 AKDSSQPETD SAFALPESNG KVEALIRGRV ANSNSKVPRQ SKFGSQMLKV ECLTGLVPQN 600 SCRYDSSLGL LTRKFVNLIH EAEDRTLDLN HTADILEVQK RRIYDITNVL EGIGLIEKTS 660 KNHIRWKRSD LLGPRELDDE IARAKAEVQS LYAEEYRLDE AIRYQQNLLR NLEEDENSKK 720 YLFFTEEDIL TLPCFQNQTL IVIKAPKASS IEVPDPDEDI SFPQKQYKMI VRSIRGPIDT 780 FLLSKYQGQN EDITTKRTTS EDSPARNGDY CVMEDEGLSS DHPDDQKITF DCLGSLGPKA 840 SGIQKIIPPE LGVNDDYWFG SDPEVSIANL WE

Sequence ? help Back to Top

Protein Sequence Length: 872 aa Download sequence

MCETNNQSGS VQNSRVTWEG CSVLLDINDG DRLVFARLSA AATLKIGNKN CSLQPLIGCA  60
FGSVFRVETG SEGPYLSRFS PSLEGNNIQE NNDSQFKDES KDNRALVDDN KAQSLTGEDI  120
DAMRRDGATG DEIVEALIAN SATFEKKTLF SQEKYRIKKQ KKYAPKVLVR RPFARSICEA  180
YFKKYPVRIG FLRVDTLSLL LSMANVSANS DVLVVDMVGG LLAGAVAERM GGTGYICSTY  240
VGKTPYSMEI VRIFNFGNDI CKSIVRSSLD HLSSSHNGSL EQTDPSNTKG GLDDQTSSSV  300
TTDEICVASE NEISNLVEDN ISHGTRGSKS VKAGEKAPEE VIKLWKENGF SSLIVAAPDQ  360
DTWSLVKELL PLLSNSAPFA IYHQFLQPLA TCMHNLQLGK MAIGLQISEP WLREYQVLPS  420
RTHPCMQMSA FGPGGGGSEG PGGSGRARVG PYEKGILSLV EAEGGRRGFE QNPSSVHGLS  480
QFQFQPLLHS HSHSHYSLTP TNGELFPSTS SPTPHLHHHH HHHSPLAPPD AFNRSRFSDF  540
AKDSSQPETD SAFALPESNG KVEALIRGRV ANSNSKVPRQ SKFGSQMLKV ECLTGLVPQN  600
SCRYDSSLGL LTRKFVNLIH EAEDRTLDLN HTADILEVQK RRIYDITNVL EGIGLIEKTS  660
KNHIRWKRSD LLGPRELDDE IARAKAEVQS LYAEEYRLDE AIRYQQNLLR NLEEDENSKK  720
YLFFTEEDIL TLPCFQNQTL IVIKAPKASS IEVPDPDEDI SFPQKQYKMI VRSIRGPIDT  780
FLLSKYQGQN EDITTKRTTS EDSPARNGDY CVMEDEGLSS DHPDDQKITF DCLGSLGPKA  840
SGIQKIIPPE LGVNDDYWFG SDPEVSIANL WE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.1	6e-89	E2F/DP family protein