PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70740.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 414aa MW: 44911 Da PI: 9.3921

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00055	167	189	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg+ F+ ++L+ H+ + H PON70740.1 167 ACSQCGEAFPKIESLELHQAVrH 189 6******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MALLTFAPEP TEPKKPHSQP KRKRPKQAKQ QKPPSSWDQI KNLLTCKQIE GSRVHDPSKN 60 GAVGYSKLGS SCGSICSFRD VVHGNTRVVH RADNSPESST VGQETGLLSR KAVNGSTARS 120 TSARSNGGAA YTSSSRGMQF RKLSGCYECH MIVDPSRYPI IPSTICACSQ CGEAFPKIES 180 LELHQAVRHA VSELGPEDSG RNIVEIIFKS SWLKKDNPIF KIERILKVHN TQRTIQRFED 240 CRDAVKARAL NSTRKNPRCA ADGNELLRFH CTTLTCALGA RGASSLCVSV PGCGVCTIIR 300 HGFHGSKSGQ AQGQNQGCES GKGVWTTASS GRAHDSLRCT DGRRAMLVCR VIAGRVKRIA 360 DDAAAEEDSV SLGSSYDSVA GYTGIYSNLE ELIVFNPKAI LPCFVVIYKP LESQ

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MALLTFAPEP TEPKKPHSQP KRKRPKQAKQ QKPPSSWDQI KNLLTCKQIE GSRVHDPSKN  60
GAVGYSKLGS SCGSICSFRD VVHGNTRVVH RADNSPESST VGQETGLLSR KAVNGSTARS  120
TSARSNGGAA YTSSSRGMQF RKLSGCYECH MIVDPSRYPI IPSTICACSQ CGEAFPKIES  180
LELHQAVRHA VSELGPEDSG RNIVEIIFKS SWLKKDNPIF KIERILKVHN TQRTIQRFED  240
CRDAVKARAL NSTRKNPRCA ADGNELLRFH CTTLTCALGA RGASSLCVSV PGCGVCTIIR  300
HGFHGSKSGQ AQGQNQGCES GKGVWTTASS GRAHDSLRCT DGRRAMLVCR VIAGRVKRIA  360
DDAAAEEDSV SLGSSYDSVA GYTGIYSNLE ELIVFNPKAI LPCFVVIYKP LESQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	27	PKRKRPKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	0.0	C2H2 family protein