PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON70643.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

C2H2

Protein Properties

Length: 383aa MW: 42511.2 Da PI: 8.7567

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON70643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	145	168	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F + +L++H+ + H PON70643.1 145 FPCTACGEIFQKPQLLEQHQAVkH 168 89******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MAPNIASLFT KYLSHFFLIF LHLGCFVFTT TTTTTDEDLR RHGYHDHHNR RSSKKRKTQK 60 AFSSSWSFIK GIFSSKSRKT SIQTDPSTPP SSSQHSIVSL VNPEPSDHLS AADPPRKKSS 120 PPPESDRVAG IGEGGLFFPL RNDIFPCTAC GEIFQKPQLL EQHQAVKHAV SELHDGDSGK 180 NIVRIIFKSG WTDTLRSPVI RRVLKIHNGS KILTRFEEYR EAVKSKAARN GAVTRSRDER 240 CIADGNELLR FHCSTFLCDL GANGNSGICN HQYCSVCGII KSGFSPKLDG ISTLSSSWRA 300 HVAIPEEIED EFRFMNVKRA MLVCRVVAGR VGSESDDVEK EGGGFDSVLG RSGSGVHTRL 360 DEEELLVFNP RAVLPCFVIV YTV

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MAPNIASLFT KYLSHFFLIF LHLGCFVFTT TTTTTDEDLR RHGYHDHHNR RSSKKRKTQK  60
AFSSSWSFIK GIFSSKSRKT SIQTDPSTPP SSSQHSIVSL VNPEPSDHLS AADPPRKKSS  120
PPPESDRVAG IGEGGLFFPL RNDIFPCTAC GEIFQKPQLL EQHQAVKHAV SELHDGDSGK  180
NIVRIIFKSG WTDTLRSPVI RRVLKIHNGS KILTRFEEYR EAVKSKAARN GAVTRSRDER  240
CIADGNELLR FHCSTFLCDL GANGNSGICN HQYCSVCGII KSGFSPKLDG ISTLSSSWRA  300
HVAIPEEIED EFRFMNVKRA MLVCRVVAGR VGSESDDVEK EGGGFDSVLG RSGSGVHTRL  360
DEEELLVFNP RAVLPCFVIV YTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-109	C2H2 family protein