PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON70123.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 617aa    MW: 68947.6 Da    PI: 8.8273
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON70123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.33.4e-1915100899
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 s +l+  rl +p kf+++++g   +s  +tle +sg++W+v l   ++ +  +l+ GW  Fv++n ++ gDf++F++dg+  f  +v+vf++
  PON70123.1  15 SANLSAERLKIPSKFVRHMEGR--SSGLVTLEGPSGKTWQVDL--LQQNEDLFLRHGWPVFVRDNYVECGDFLIFRYDGELHF--TVQVFDQ 100
                 66788899********888877..5568***************..999999**************************996666..9999987 PP
2B348.91.2e-15260351296
                 EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 + ++++ +v+ s  l +p +f  +h   ++++++++l++++g+ W+v+    ++   +++l +GW  Fv+ n++k gD+++F+l+g+ ef  +v++
  PON70123.1 260 VRIMKSFNVSGSYTLNIPYQFSMAHL--PNCKVKIVLQNLNGQCWTVNSVPsTRVHTSHTLCGGWMAFVRYNDIKIGDICIFELVGECEF--RVHI 351
                 56667778888899*******98996..4699****************9445555667999*************************9999..5555 PP
3B3452e-14493585196
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 f+k++++ + + s  l +p +f ++h  +     ++++ l++++g+ W+v+   + k gr  +++ +GW  Fv+ n+++ gD+++F+l+g+ e   +v+
  PON70123.1 493 FVKIMKKFNISGSYTLKIPYQFSTAHlpN----YKTEILLRNLKGECWTVNSVPDSK-GRlvHTFCGGWMAFVRGNDINIGDICIFELVGNYEM--RVH 584
                 778888888888889********9**533....3468***************44333.33579999**********************997444..454 PP

                 E CS
          B3  96 v 96 
                 +
  PON70123.1 585 I 585
                 4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    
MASGRRRPHF FAFYSANLSA ERLKIPSKFV RHMEGRSSGL VTLEGPSGKT WQVDLLQQNE  60
DLFLRHGWPV FVRDNYVECG DFLIFRYDGE LHFTVQVFDQ SACEKEAAFH SECSQDICDK  120
NFGQKRARED GMSSSDKIVE GVLKKMRESS SELGSQQIHR NQEAMLDQCR EKGCHFEGTK  180
HCEVANFSKE TQLYGNSPKS YAVRSQSEIC NEKPDIVLFK AKALQSLSGD KFNANGGVCV  240
QMSLAHEVVQ SFTSCYPYFV RIMKSFNVSG SYTLNIPYQF SMAHLPNCKV KIVLQNLNGQ  300
CWTVNSVPST RVHTSHTLCG GWMAFVRYND IKIGDICIFE LVGECEFRVH ILGVGNEGVD  360
CQSGKVAPSR LSAGHAVTSH KSFKGLSKKM RGNSSKVHSK SLKTLDVSDK KGSKKLIEAA  420
FPNDTKKRGS VPKALTTVAL CSQSNPANKK LVVHRSRDVE DELGSQARSD LRMMLALDEE  480
RAARSFSSCF PNFVKIMKKF NISGSYTLKI PYQFSTAHLP NYKTEILLRN LKGECWTVNS  540
VPDSKGRLVH TFCGGWMAFV RGNDINIGDI CIFELVGNYE MRVHISGVGK RGHDHQVGEA  600
TSNELALISS TNNHLSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.17e-18B3 family protein