PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69961.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Trihelix

Protein Properties

Length: 1025aa MW: 114285 Da PI: 7.7447

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.2	5e-09	250	307	23	81
trihelix 23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 +gk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e++ +y PON69961.1 250 KGKTRADKDREVAEFLQRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQV-GKSY 307 4678888899*************************************9965555.3445 PP

Sequence ? help Back to Top
Protein Sequence Length: 1025 aa Download sequence
MGDKKGETTK KQQQQSKQQP QPQPQQQQQI SSSSPKDPIL DESTETTRPH HHHGHPHQQQ 60 STLVVSGASH IISAPLFIPS GATSSSPFDQ QFDQAATATA VVSTNPKRPR YTTGQWKLLP 120 SPSSQQKQTA QVTVLTGESS PVSAQQQPQL LLQSTAASSS DTASSPSHSL PSLSASGQDT 180 SKPDLAGENP IHQQFRKGKY VSPVWKPNEM LWLARAWRVQ YQGGSSPHNG SGSSSRVEPS 240 GTDHLGSQTK GKTRADKDRE VAEFLQRHGV NRDAKTAGTK WDNMLGEFRK VYEWERGGER 300 EQVGKSYFRL SPYERKLHRL PASFDEEVFE ELSQFMGSKM RTPQGRPGAG SLTVAGDPRS 360 LPGPPPSFKE DDQFPLSART TKQLIMGSAG EAFYYGGRGA LMGFESAVDI GGPSPPSISS 420 KELRRIGKIR MTWEESVSLW AEEGEHNKGR VKLQGSSFLN ADELTYLDDA MVACNMEAFE 480 EGPLRGFSVD RFVSGQQVKV FGRKKPFSVS ASGFPEKVQL PLAEPSVRST PPWEFQDPTD 540 YYVGCLRVPP PSIPTLFELS WYLQEPPPEE LRFPLRKDVY RDLPRGKDLF FTISNELLDC 600 RTLTYDILSP ILRTNPSVTS STSTSRDSFI GLWDDCINRV VSKFCSVGIV NVRKPTNNLS 660 STEVLQDQWP NVTGFVRGFC LWRGEETDQL REGQIDPSNS IVEKLLWTYQ DLPYILGYCA 720 VGFLVTFCAL SRGANQDRII RTDLQTLDLS SPSDRLKALV PCYRVASLLP LLADRCFNSV 780 NNIINVASSK MFPYSDFERL DMGNGNVTEI TPNTVTRFYP NRRKWAAVKE IYDFLDHRIP 840 HAEFIHHSSE KDLGLVFKPR GYSRPSRPTH IDQLVEALKC VTKALVALHD LSFMHRDLSW 900 DKVVRRVDRE NEWFVAGFEE AVVAPQIYPM MVQVAGTATE QVAARVSHAP EMERGLHGVK 960 VDVWGVGYLV RTCGVAGVPK MLRELQSRCL DQNPEQRPTA ADCYHHLLQL QSSLQSPTAS 1020 GVVLM

Sequence ? help Back to Top

Protein Sequence Length: 1025 aa Download sequence

MGDKKGETTK KQQQQSKQQP QPQPQQQQQI SSSSPKDPIL DESTETTRPH HHHGHPHQQQ  60
STLVVSGASH IISAPLFIPS GATSSSPFDQ QFDQAATATA VVSTNPKRPR YTTGQWKLLP  120
SPSSQQKQTA QVTVLTGESS PVSAQQQPQL LLQSTAASSS DTASSPSHSL PSLSASGQDT  180
SKPDLAGENP IHQQFRKGKY VSPVWKPNEM LWLARAWRVQ YQGGSSPHNG SGSSSRVEPS  240
GTDHLGSQTK GKTRADKDRE VAEFLQRHGV NRDAKTAGTK WDNMLGEFRK VYEWERGGER  300
EQVGKSYFRL SPYERKLHRL PASFDEEVFE ELSQFMGSKM RTPQGRPGAG SLTVAGDPRS  360
LPGPPPSFKE DDQFPLSART TKQLIMGSAG EAFYYGGRGA LMGFESAVDI GGPSPPSISS  420
KELRRIGKIR MTWEESVSLW AEEGEHNKGR VKLQGSSFLN ADELTYLDDA MVACNMEAFE  480
EGPLRGFSVD RFVSGQQVKV FGRKKPFSVS ASGFPEKVQL PLAEPSVRST PPWEFQDPTD  540
YYVGCLRVPP PSIPTLFELS WYLQEPPPEE LRFPLRKDVY RDLPRGKDLF FTISNELLDC  600
RTLTYDILSP ILRTNPSVTS STSTSRDSFI GLWDDCINRV VSKFCSVGIV NVRKPTNNLS  660
STEVLQDQWP NVTGFVRGFC LWRGEETDQL REGQIDPSNS IVEKLLWTYQ DLPYILGYCA  720
VGFLVTFCAL SRGANQDRII RTDLQTLDLS SPSDRLKALV PCYRVASLLP LLADRCFNSV  780
NNIINVASSK MFPYSDFERL DMGNGNVTEI TPNTVTRFYP NRRKWAAVKE IYDFLDHRIP  840
HAEFIHHSSE KDLGLVFKPR GYSRPSRPTH IDQLVEALKC VTKALVALHD LSFMHRDLSW  900
DKVVRRVDRE NEWFVAGFEE AVVAPQIYPM MVQVAGTATE QVAARVSHAP EMERGLHGVK  960
VDVWGVGYLV RTCGVAGVPK MLRELQSRCL DQNPEQRPTA ADCYHHLLQL QSSLQSPTAS  1020
GVVLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-07	Trihelix family protein