PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON69947.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 25139.9 Da    PI: 8.4604
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON69947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.8e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k ien +nrqvtfskRr g+lKKA+ELSvLCd+evaviifs++g+lye+ss
  PON69947.1  9 KLIENATNRQVTFSKRRSGLLKKAHELSVLCDVEVAVIIFSQKGRLYEFSS 59
                569**********************************************96 PP
2K-box66.49.8e-2376170397
       K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                 +++++  +e+ + +l+ e + L k+ie L+ ++R+llG d++s+s++eLq++  +Le+sl++iR++K++l++eqie+l  ke+ l een +Lr k
  PON69947.1  76 EQTNNIEAEQYMRRLKLETSELAKKIELLEISKRKLLGHDISSCSYEELQEIDCRLERSLRSIRARKDQLFKEQIEQLEGKERLLLEENIQLRGK 170
                 34444488999999******************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MVRGKIKMKL IENATNRQVT FSKRRSGLLK KAHELSVLCD VEVAVIIFSQ KGRLYEFSST  60
DMQKMIERYR KHAKDEQTNN IEAEQYMRRL KLETSELAKK IELLEISKRK LLGHDISSCS  120
YEELQEIDCR LERSLRSIRA RKDQLFKEQI EQLEGKERLL LEENIQLRGK NAIGANLWQP  180
LAQEKEVVTY CSQSTDSTNT EVETELYIGL PEIRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.32e-85MIKC_MADS family protein