PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON69416.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MIKC_MADS

Protein Properties

Length: 271aa MW: 31622.1 Da PI: 9.8745

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON69416.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.6	1.2e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyeys+ PON69416.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59 79***********************************************95 PP
2	K-box	108.7	6.5e-36	77	173	4	100
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 s++ s++ea+ + +qqe++kL+++i++Lq+++Rh+lGe ++s+s+k+L++Le +Le+++++iRskKne+l+++ie++qk+e elq++n++Lr+k +e PON69416.1 77 SNTGSVAEANVQFYQQESSKLRRQIRELQNSNRHILGEAISSMSFKDLKSLEGRLERGMSRIRSKKNEMLFAEIEYMQKREMELQNHNNYLRAKAAE 173 444459***************************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYSNN 60 SVRATIEKYK KACTDSSNTG SVAEANVQFY QQESSKLRRQ IRELQNSNRH ILGEAISSMS 120 FKDLKSLEGR LERGMSRIRS KKNEMLFAEI EYMQKREMEL QNHNNYLRAK AAENERIQQQ 180 QEQQEEQQIK QQMNLMPVAA RAASESNMPA AQSYDHRSFL PVTLMDTSHH YSRPDQTIEV 240 QEKRKETWLF LPSLFLYSNI SVVAIKLLMY M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58780.1	1e-106	MIKC_MADS family protein